Alkalibacter rhizosphaerae: J0B03_03000
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Entry
J0B03_03000 CDS
T07100
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
alka
Alkalibacter rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
alka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alka03400
]
J0B03_03000
DNA repair and recombination proteins [BR:
alka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J0B03_03000
Archaeal homologous recombinant proteins
J0B03_03000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
AAA_21
ABC_ATPase
AAA_22
Polyketide_cyc2
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QSX09051
UniProt:
A0A974XG39
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All DBs
Position
complement(607808..610582)
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AA seq
924 aa
AA seq
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MKPNKLTMSAFGPYAEPTTIDFKRLGDQGLYLVTGDTGAGKTTIFDAITFALFGEASGDT
REAAMFRSKYADPKTPTYVEMEFEYQGKTYIVQRNPEYDRPKMSGEGWTRQKAEATLSFS
DHRMPVTKTRDVTKAVVEIIGLDREQFTQIAMIAQGDFLKLLLAKTEERSKIFREIFNTK
PYEHVQDRLKFESNRLNRSYSELTASIRQYLEGILWSEEDTLGLTLKKYLDQDGLPPIGD
LLQLIRTMIEKDQGAISVLTENIRQLQKTMDARNQQLGEAKNVAKAKDELEKTVLAKNIL
DSQMEPKRIRYEKALEKVGTRDGLLERLQQETGRLADYDKLEQWNVEIDRAEKELQGSRQ
RQELKLKEKKRITEELTKAKEERSRLDPVEKEIQTLDFRKKELEQKNQALNDLERLENNH
LTLMHGLEVRQQAYLESQKAFEVVQLRYQKAHKQFFDQQAGVLAQTLEESKPCPVCGSLE
HPAPALLTEETINEDQLKDMQDRVDGMYGKVSQASEAASSQRGRMESAREEVMVAGKRLF
GEIQLDQLKRRRELEQEKLKQDATTLNDQLDIWQKRKVQKDALDRQIPLLEKRLLDHGED
LNKLESVLSGLKERLEALKNNEKELKRRLPHENKEAASKVVQGLREEKEQMDREWKDASG
AYEKAKEEQNRLLSAIQTLETQVKRGEDADVQKLEEELKVLGESRKEETRKKDQLDQRCL
SNQRSQDKIEKQHRTMAEVEERWNWMKALSDTANGNLRGKDKIMLETYIQMAYFDRIIAR
ANTRFMTMTSGQYELARKTEGENQRSQTGLELDVIDHYNGSTRSVKTLSGGESFKASLSL
ALGLADEIQASAGGIRLDTMFVDEGFGSLDEESLDQAIKALHQLSEGKRLVGIISHVTEL
KNRLDRQIVVKKSREGGSTVRVEA
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgaataaattgaccatgagtgcctttggcccttacgcagaaccaacgaccatc
gactttaaacgattgggggaccaaggtctctacctggtgactggtgatacgggagctgga
aaaaccaccatttttgatgccattacctttgccctttttggagaagccagtggagacacc
cgggaagctgccatgtttcgaagcaagtatgcagatcccaagaccccgacttatgtggaa
atggagtttgaataccaggggaaaacctacatcgttcaacgcaacccggaatacgaccgc
ccaaaaatgagcggagagggctggaccaggcaaaaggcggaagccaccttgtccttttca
gaccacagaatgccggtgacgaaaaccagagatgtaacgaaagcagttgtggagatcatc
ggactggaccgggagcaattcacccagatcgccatgatcgctcaaggggatttcttaaag
ttgctactggcaaaaacggaagaacgcagcaagatttttcgggagatcttcaacaccaaa
ccctacgaacatgtccaagatcgattgaaattcgagtccaacagactcaatagaagctac
agtgaattgacggccagcatccgtcaatatttggagggaattctttggtcggaagaagat
actctgggtttgaccttgaagaagtacctggatcaggatggcctgcctcccataggggat
cttctccaattgattcgaaccatgatcgaaaaagatcagggagcgatatcggttttgaca
gagaacataaggcaacttcagaaaaccatggatgccagaaaccagcagctgggtgaagcg
aaaaatgtagcaaaagccaaagatgaattggagaagacggtcttggcaaaaaatatcctg
gattcccagatggaaccgaagcggatccgctatgaaaaggctctggaaaaggtggggacg
agagatggtttgttggaacgtctccagcaggagaccggtagactggcagattacgataaa
ctggaacaatggaatgtggaaatcgatcgagcggaaaaggagctccagggatcgagacaa
cgacaagaactaaagttgaaagaaaaaaaacgcatcacggaagaattgaccaaggccaag
gaagagcgatcaagattggatccggtggaaaaagagatccaaaccctggattttcgaaaa
aaggagctggaacaaaagaatcaggcactaaatgacctggaacgattggaaaacaatcac
ttgacactgatgcatgggctggaggttcgtcagcaagcgtatctggagtcgcaaaaagcc
tttgaagtggtgcaacttcgataccaaaaagcccacaagcaatttttcgatcagcaggca
ggcgtgttggcccaaaccttggaggaaagcaaaccctgtcctgtttgcggatctttggaa
catccggcgccagccttgctgacagaagagaccatcaacgaggaccagttgaaagacatg
caagaccgggtggatggaatgtatggaaaagtatctcaagccagcgaagcagcctcctct
caaagaggccgaatggagagcgccagagaagaagtgatggtggctggaaaaaggcttttt
ggagagatccagttggaccagttgaaacgacgccgtgaattggaacaagagaaactgaag
caggatgcgacgacgctgaacgaccagttggatatttggcagaaacgaaaagtgcagaag
gatgcattggaccggcagatccccctattggaaaagagattgttggatcatggcgaagat
ttgaacaaattggagagtgtcctgagcgggttgaaggagcggctggaagcactgaaaaac
aatgagaaagaactaaaacgccggctgccccatgagaacaaggaagctgcaagcaaagtg
gttcaagggcttcgcgaagaaaaggaacaaatggaccgtgaatggaaagatgcttccggt
gcctatgagaaagccaaagaagagcaaaatcgacttctttctgcgatccagacactggag
acccaggtcaaaagaggagaagatgcagatgttcagaagttggaagaagaattgaaggtc
ctgggggaaagccgaaaggaagagacaaggaaaaaagaccaactggaccagcgctgtctg
tccaatcagcgatcgcaggacaaaatcgaaaaacagcatagaaccatggctgaagtggag
gagcggtggaactggatgaaagccctgtcggatacggccaacggaaatctgcggggaaaa
gacaagatcatgctggaaacctatatccaaatggcttattttgaccggatcatagcacgg
gcaaatacccgttttatgaccatgacctccggacaatatgaattggcccgcaagaccgaa
ggggagaatcaacgaagccaaaccggtcttgaattggatgtcatcgaccactacaacggc
tccactcgaagtgtgaagaccctttccgggggagaaagctttaaagcttccctgtccctt
gcattgggtttggcagatgagatccaagccagtgccggcgggatccgtttggataccatg
tttgtggacgaaggatttgggtccctggacgaagaatctttggaccaagccataaaagca
ctgcatcaattgtcggaaggaaaaaggttggtagggatcatatctcatgtgacggagttg
aagaatcggttggaccggcagatcgtcgtaaagaaaagcagagagggtggaagcacggtc
cgtgtagaggcatag
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