Alkalibacter rhizosphaerae: J0B03_03535
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Entry
J0B03_03535 CDS
T07100
Name
(GenBank) hypothetical protein
KO
K03093
RNA polymerase sigma-I factor
Organism
alka
Alkalibacter rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
alka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alka03021
]
J0B03_03535
Transcription machinery [BR:
alka03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J0B03_03535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
HTH_36
P4Ha_N
Myb_DNA-binding
Sigma70_ECF
REV1_C
CetZ_C
DHR-2_Lobe_C
Motif
Other DBs
NCBI-ProteinID:
QSX09154
UniProt:
A0A975AI03
LinkDB
All DBs
Position
complement(723926..724600)
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AA seq
224 aa
AA seq
DB search
MRELDQRIKSIAEEKNKEKLEQLIREWEFFILKSAVRVSKKYVSKQDEEWSVALEAFMEA
VQRYDMDKGAFLPFARRMIHHRLVDHFRKQGRSGSELPLESLDRLRVYKPDPTSRDLRDE
IDALTQVLQLYGLDFADLAKASPKSDKTVKACKKILFFLTSHPELTELIKDSKLLPLKEI
EKNTGVPRKTIERHRKYLIAAMEILTGDYPYLAAYIPRDGGEGQ
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggatcaacggatcaagagcattgcagaggaaaaaaacaaggagaaactg
gagcagttgattcgggagtgggaattttttattttgaaatcagcagttcgcgtttccaaa
aaatatgtgagcaaacaagatgaagaatggtctgtcgccctggaagcatttatggaagcg
gttcagcgatacgacatggataaaggtgcctttcttccatttgcccggagaatgatccac
caccggttggtggatcattttcgaaaacaaggaagatcaggatcagaattgccattggaa
agtctggaccgtcttcgggtgtacaagccggatccaacgtccagagatctgagggatgag
atcgatgctttgacacaagtacttcagctgtacggactggattttgctgatttggccaaa
gcatcccccaaatcggataaaacggtcaaggcatgcaagaagatcctgttttttttgacg
agtcatccggaattaacggagttgatcaaggacagcaaacttttacccttgaaagaaatt
gaaaaaaatacgggggtaccccgaaaaaccatcgaaagacatcgtaaatatttgatagct
gcaatggagatccttaccggggattatccgtatctggcagcctatatcccgagggatgga
ggagagggacaatga
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