Alkalibacter rhizosphaerae: J0B03_07880
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Entry
J0B03_07880 CDS
T07100
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
alka
Alkalibacter rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
alka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alka03019
]
J0B03_07880
Messenger RNA biogenesis [BR:
alka03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J0B03_07880
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GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QSX07742
UniProt:
A0A974XDB3
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All DBs
Position
1571302..1572261
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AA seq
319 aa
AA seq
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MSKNESIKSMEYGQNVVSFLMIKESDLKKAKNDSLYLDMILGDAYGNQANAKLWNADGTM
ASYKTGDLVLVDALVQKFNGRLQLRINRLRLVEEGDDVNIEDFVDSAPENPENMYAYMME
ILADYENEELRMLTEYMLEEKKDRLFYYPAAKTHHHAIKAGLLYHTFSMLKLAVELAKLY
PFIDRDLLFSGVILHDLSKVDEMVSNELGIVEDYSKEGKLLGHIIQGIVEIDKAAASLGI
SSECRLLLEHLLLSHHYHAEYGSPKKPLLPEGELLHYIDMIDARMFTMEKVLRDVEPGSF
AERNMTLEYRSMYKPDWQA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaacgaatcgatcaaatcgatggaatacggacaaaatgtggtttcctttctg
atgatcaaggaatcggacctgaaaaaagcaaaaaacgattccctgtacctggacatgatc
ctgggagatgcctacggcaaccaggccaatgccaaattgtggaacgcagatgggaccatg
gcatcctacaagacgggagacctggtcctggtggacgctctggtgcaaaaattcaacgga
cggctgcagctgcggatcaaccggcttcggctggtcgaagaaggggacgatgtgaacatc
gaagactttgtggacagtgcaccggaaaacccggaaaacatgtacgcctacatgatggag
atcctggccgactatgaaaatgaagagcttcggatgttgacggagtacatgctggaagaa
aagaaggaccgacttttctattatccggcagccaagacccatcaccatgccatcaaggcc
ggcttgctctaccacaccttttccatgctgaaactggcggtggaactggcaaagctgtac
ccttttatcgacagggacctccttttttccggggtcattctccacgacctgtccaaggtg
gatgaaatggtctccaatgaattggggatcgtggaagactacagcaaggaagggaaattg
ctgggccacatcatccagggaatcgtggagatcgacaaggcggcggcatccctgggcatc
agcagcgaatgtcggctcctgctggaacacctgctattgtcccatcattatcacgcagaa
tacggaagtccgaaaaagcctcttttgccggaaggggagctgctccattacatcgacatg
atcgatgccaggatgttcaccatggaaaaagtccttcgggatgtggaaccggggagcttt
gcagagagaaacatgaccctggaataccgcagcatgtacaaaccggactggcaggcgtaa
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