KEGG   Alkalibacter rhizosphaerae: J0B03_07880
Entry
J0B03_07880       CDS       T07100                                 
Name
(GenBank) HD domain-containing protein
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
alka  Alkalibacter rhizosphaerae
Brite
KEGG Orthology (KO) [BR:alka00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alka03019]
    J0B03_07880
Messenger RNA biogenesis [BR:alka03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     J0B03_07880
SSDB
Motif
Pfam: HD TraI_2 tRNA_anti-codon
Other DBs
NCBI-ProteinID: QSX07742
UniProt: A0A974XDB3
LinkDB
Position
1571302..1572261
AA seq 319 aa
MSKNESIKSMEYGQNVVSFLMIKESDLKKAKNDSLYLDMILGDAYGNQANAKLWNADGTM
ASYKTGDLVLVDALVQKFNGRLQLRINRLRLVEEGDDVNIEDFVDSAPENPENMYAYMME
ILADYENEELRMLTEYMLEEKKDRLFYYPAAKTHHHAIKAGLLYHTFSMLKLAVELAKLY
PFIDRDLLFSGVILHDLSKVDEMVSNELGIVEDYSKEGKLLGHIIQGIVEIDKAAASLGI
SSECRLLLEHLLLSHHYHAEYGSPKKPLLPEGELLHYIDMIDARMFTMEKVLRDVEPGSF
AERNMTLEYRSMYKPDWQA
NT seq 960 nt   +upstreamnt  +downstreamnt
atgagtaagaacgaatcgatcaaatcgatggaatacggacaaaatgtggtttcctttctg
atgatcaaggaatcggacctgaaaaaagcaaaaaacgattccctgtacctggacatgatc
ctgggagatgcctacggcaaccaggccaatgccaaattgtggaacgcagatgggaccatg
gcatcctacaagacgggagacctggtcctggtggacgctctggtgcaaaaattcaacgga
cggctgcagctgcggatcaaccggcttcggctggtcgaagaaggggacgatgtgaacatc
gaagactttgtggacagtgcaccggaaaacccggaaaacatgtacgcctacatgatggag
atcctggccgactatgaaaatgaagagcttcggatgttgacggagtacatgctggaagaa
aagaaggaccgacttttctattatccggcagccaagacccatcaccatgccatcaaggcc
ggcttgctctaccacaccttttccatgctgaaactggcggtggaactggcaaagctgtac
ccttttatcgacagggacctccttttttccggggtcattctccacgacctgtccaaggtg
gatgaaatggtctccaatgaattggggatcgtggaagactacagcaaggaagggaaattg
ctgggccacatcatccagggaatcgtggagatcgacaaggcggcggcatccctgggcatc
agcagcgaatgtcggctcctgctggaacacctgctattgtcccatcattatcacgcagaa
tacggaagtccgaaaaagcctcttttgccggaaggggagctgctccattacatcgacatg
atcgatgccaggatgttcaccatggaaaaagtccttcgggatgtggaaccggggagcttt
gcagagagaaacatgaccctggaataccgcagcatgtacaaaccggactggcaggcgtaa

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