Alkalibacter rhizosphaerae: J0B03_08320
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Entry
J0B03_08320 CDS
T07100
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
alka
Alkalibacter rhizosphaerae
Pathway
alka03030
DNA replication
alka03430
Mismatch repair
alka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J0B03_08320
03430 Mismatch repair
J0B03_08320
03440 Homologous recombination
J0B03_08320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alka03032
]
J0B03_08320
03400 DNA repair and recombination proteins [BR:
alka03400
]
J0B03_08320
Enzymes [BR:
alka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J0B03_08320
DNA replication proteins [BR:
alka03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J0B03_08320
DNA repair and recombination proteins [BR:
alka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J0B03_08320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QSX07816
UniProt:
A0A974XKV0
LinkDB
All DBs
Position
1658753..1662211
Genome browser
AA seq
1152 aa
AA seq
DB search
MGSFTHLHLHTEFSLLDGFCKMDDLVTQAKELGMSSLAITDHGVMFGVVDFYKACKREGI
KPIIGCEVYVAPRSMDSKESKLDSNPYHLVLLAKDRTGYENLMKIVSAGFVDGFYYKPRV
DVDYLRDHAEGLVCLSACLAGEIPRAISGQDMEKAVETARTYQEIFGDDFYLELQDHRMP
EQKPVNEGLVDISRRLNIPMVATNDVHYVHKENAKSHDILLCIQTATNVDDENRMRFPND
EFYLKSRSDMEALFSDLPEVLDNTQIIADKCNLEFSFDQIHLPRYPLPEGTKPKEYLREL
CFQGLHKKYAKEDEQLTSRLEYELQVIDEMGYNDYFLIVWDFIKYAKDNGIMVGPGRGSA
AGSIVSYVLDITTIDPIEYNLIFERFLNPDRISMPDIDIDFCYERRQEVIDYVVEKYGHD
HVAQIITFGTMAARAAIRDVGRSMNIPYNKVDKVAKLIPMEIGMTIEKALRVNPKLVELC
KEDPQTQELIDMSRSVEGLSRHASTHAAGVVISNKPVVEHVPLYRNNDSITTQFTMTLLE
ELGLLKMDFLGLRTLTVIRDAVLNVEKSKGITLDMDQLPFDDKDVYDLISSGDTLGIFQL
ESAGMQRFMSNLRPDSFEDIIAGISLYRPGPMEQIPMYIRNKKNPKEITYIHEILRPILD
VTYGSMVYQEQVMQIVRDVAGYSMGRSDLVRRVMSKKKMDVMEAERKVFIYGETDQEGKV
LVDGALRRGVSVEQANKIYDQMIDFAKYAFNKSHAAAYAVIAYQTAWLKKHYPVEFMAAL
LTSVRGNETKVAQYIADGKKMGIQVMPPDVNESHEDFTVVADKIRFGLTAVKNVGENAVK
SIIRNRKEGPYTTFGDFCSRSDMKVLNKRAIESLIKCGAFDSFGVYRSQLMHTYEKIIDN
IQTDRKYKIDGQISLFANDSAWSGPKEVYPDIPEYEEGYRLLLEKEMLGLYITGHPLESY
RELLEKSSTVNGGIIDHYEEMADAGLRDGQMVTIGGIVGAKKNLLTKKNQTMCFLTMEDL
YGAIEVVVFPTVYARYEHLLDLDNKLLIKGRLNMSEDQASSILCEEIVELERMKRKDRFQ
GVQISVENMGDQKIQQMKEVLQKYRGDKPIVLYSREEDRKYKASKSLWVQESSEAIEALC
QIMGKGNVEIIQ
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttttacacacctgcacttgcatacggagttcagcctgctggacggattctgc
aaaatggacgatctggtcacccaggctaaagaactggggatgagcagccttgccataacg
gaccatggcgtcatgtttggcgtggtggatttttacaaggcctgcaaaagagaagggatc
aaacccatcatcggctgtgaagtatacgttgcaccccgcagcatggacagcaaggaatcc
aaactggactccaatccataccatctggtcttgctggcaaaagatcggaccggatatgaa
aatctcatgaagatcgtttctgccggttttgtagacggattctattacaagccccgggtg
gatgtggactatcttcgtgaccatgcagaaggactggtctgtttgagtgcctgcctggca
ggggagatccccagggccatatccggacaagacatggagaaagccgtggaaacagccagg
acctatcaggagatttttggggatgacttttatctggagctgcaggaccatcgcatgccg
gaacaaaaaccggtcaatgaaggactggtggacatatcccgccgactgaatataccaatg
gtggccaccaacgatgtgcattatgtacataaggaaaatgccaagagccatgatatactt
ttatgtatccagaccgccaccaacgtggacgacgaaaaccggatgcgctttcccaacgat
gaattctatttgaaaagccgttccgacatggaggcattgttttctgatctgccggaagta
ctggataacacccagatcatagcggacaagtgcaacctggaattttctttcgaccagatc
catctgccccgataccctttgccggagggaacgaagcccaaggaatacttgagggagctt
tgttttcagggtttgcataaaaagtatgcaaaggaagatgaacaactgaccagccgcttg
gaatacgaactgcaggtcatcgacgagatgggttacaacgattatttcctgatcgtatgg
gatttcatcaaatacgccaaagacaatgggatcatggtgggtccgggacgaggcagtgcc
gctggaagtatagtatcttatgtgctggacatcactaccatcgaccccatcgaatacaat
ttgattttcgaacgttttttgaatccggatcgaatttccatgccggatatcgacattgat
ttctgctacgaacgaagacaggaagtcatcgattatgtggtggaaaaatacggacacgat
catgtggcccagatcatcaccttcggtaccatggctgccagagcggccattcgggatgtg
ggacgatccatgaacattccttacaacaaagtggacaaggtggccaaactgatccccatg
gagatcgggatgaccattgaaaaggcattgagggtcaatcccaagctggtggaattgtgc
aaggaagatccacaaacgcaagaacttatcgacatgtcccggtccgtagagggactttcc
agacatgcctccacccatgcggcgggagtggtgatctccaacaagccggtggtggaacac
gtgcccttatatcggaacaacgattccatcaccacccagttcaccatgactttgctggaa
gagctgggattgttgaaaatggattttctgggtcttcggacgttgacagtgatccgggat
gcggtcctcaatgtggaaaaaagcaaggggatcactctggatatggatcaacttcccttt
gacgacaaggacgtatatgatctgatttccagtggggacaccctggggatctttcaactg
gaaagcgccgggatgcagcgtttcatgtccaaccttcgtcccgactctttcgaagacatc
attgccgggatcagcctctaccgtccaggtcccatggagcagatccccatgtacatacga
aataaaaaaaatccaaaagagatcacctatatccatgagatcctgcggcccattcttgat
gtgacctacggcagcatggtctatcaggaacaggtcatgcagatcgtccgggatgtggcc
ggctattccatgggacgtagcgacctggtgcgccgggtcatgtccaagaaaaaaatggat
gtcatggaagcggaaagaaaggtcttcatttacggagaaaccgaccaggaaggcaaggtc
ctggtggacggagccctgcgacggggggtctccgtggagcaggccaacaagatctacgac
cagatgatcgatttcgccaaatatgccttcaacaaatcccatgccgccgcgtatgcggtc
atcgcctatcagacggcatggttgaaaaagcactatcctgtagaattcatggccgccttg
ctcaccagtgttcggggcaatgaaacgaaagtggcccaatatatcgccgacgggaaaaaa
atgggcattcaagtcatgccgccggatgtgaatgaaagccatgaagatttcactgtcgtg
gccgacaagatccggtttggattgacagccgtcaaaaatgtcggcgaaaacgcggtaaag
agcatcattcgaaaccgcaaggaaggcccgtacaccacttttggggatttctgttcccga
tccgacatgaaggtgctcaacaagcgggccatcgaaagcctgatcaaatgcggagccttt
gactccttcggcgtctatcgttcccaattgatgcatacctatgagaagatcatcgacaac
atccaaacagatcgaaaatacaagatcgacgggcagatctccttgtttgccaacgattcg
gcctggagcggaccgaaagaagtctatcctgacattccggaatacgaagaaggttatcgc
ctcttgctggaaaaggagatgctgggactctacatcaccggccaccccctggaatcctac
cgagaactgctggaaaaatccagtaccgtaaatggcgggatcatcgatcactatgaagaa
atggcggatgcaggtttgagggacggccaaatggtcaccattggcggcattgttggtgcc
aagaaaaatttgttgacgaaaaagaaccagaccatgtgttttttgaccatggaggatctg
tatggagccatcgaggtggtggtttttcccaccgtttacgccagatatgaacatttgctg
gacctggacaacaagcttctgatcaagggaaggctgaacatgagcgaggatcaggcctct
tccattctttgcgaggaaatcgtggagctggaaaggatgaagcgaaaagatcgcttccag
ggagtgcagatctccgtggaaaacatgggagatcaaaagatccagcagatgaaggaagtg
ttgcaaaaataccggggggacaagcccatcgttttgtactcccgggaagaggaccgcaaa
tacaaggcgagcaagtctctttgggtccaggaatccagtgaagcaatcgaagccctttgc
cagatcatgggcaaaggaaacgtggagatcattcaatag
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