Alkalibacter rhizosphaerae: J0B03_09650
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Entry
J0B03_09650 CDS
T07100
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
alka
Alkalibacter rhizosphaerae
Pathway
alka03420
Nucleotide excision repair
alka03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J0B03_09650 (pcrA)
03430 Mismatch repair
J0B03_09650 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alka03400
]
J0B03_09650 (pcrA)
Enzymes [BR:
alka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J0B03_09650 (pcrA)
DNA repair and recombination proteins [BR:
alka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J0B03_09650 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
J0B03_09650 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
ResIII
DUF7286
Motif
Other DBs
NCBI-ProteinID:
QSX08060
UniProt:
A0A974XG80
LinkDB
All DBs
Position
1938268..1940475
Genome browser
AA seq
735 aa
AA seq
DB search
MKLTEGLNERQQQGVLSTDGPVLILAGAGSGKTRTIIHRIAYILQEKKAKPWEILALTFT
NKAAEEMRSRIQEMNVDGAKDLWMSTFHSMCAKMLRFHANLIGYDRNYVIYDMGDVKILI
KECLTELNLDDKMYPVSAMINRISSLKEKGIHPADFDKQAVGDFREEKIAAIYDLYQKKL
RGNNAMDFDDLLVNTVRLFEEHPDILTYYQDKFKYILVDEYQDTNPIQFRITDMLANKHK
NICVCGDDDQSIYAFRGADIRNILEFEKHYPKATVIKLEQNYRSTPNIIEAANSVIKNNQ
GRKDKKMWTDKEPGELIEIHELNDEREESNFVTNQIRSMVRSGFYEHKDFAVLYRTNAQS
RVFEESFMAAQVPYKMVGGTKFYSRQEIKDIIAYLVVLDNPRDDLSLKRIINTPKRGIGA
ATIGKLEDFAEFKGWALYDVIMNLDHMVGLTAGVMKKLEEFSELIRHFEETKEHQTIAAL
MEEVMDSSGYMDMLESGKMQNAQSRIENLKELISAAVEFEKNSVENDLTAFLENVSLFSE
TDNIPEEGGEVLLMTVHNAKGLEFPVVFLPGMEEGIFPHERSKEDEVELEEERRLCYVGI
TRAEKKLFMTHARYRTVYGRLSVNMRSRFLDEIPAELVEVVETEKPAAPVRKQRDSYNSS
FSMNKQMGRFIPDGKKSSQAPEEKTEKSAGPGAKVIHKVWGEGTVIAMDGDIATIAFPNM
GIKKVAWSMAPIKIV
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaacggaaggactcaacgaacgacaacaacagggggtgctcagcaccgacgga
cccgtattgatcctggcgggagccggttccggaaaaacgagaaccatcatccaccggatc
gcctatatcctgcaggagaaaaaagcaaaaccatgggagatcctggccctgacctttacc
aataaagcggcggaagagatgcgaagccggatccaggaaatgaatgtagacggcgccaag
gatctttggatgagcacctttcattccatgtgcgccaaaatgctccgtttccatgccaat
ctgattggatacgatcgcaactatgtgatctacgatatgggagatgtgaagatcctgata
aaagaatgcctgacggagttgaacctggacgacaagatgtacccggtcagcgccatgatc
aaccggatcagttccctgaaggaaaaggggatccatccggcggatttcgacaagcaggcc
gtaggggatttccgggaggaaaagatcgccgccatttacgatctctaccagaagaaactt
cggggaaacaacgccatggactttgacgacttgctggtgaatacggtccgcctttttgaa
gaacatccggacattttgacctattatcaggacaaattcaaatacatcctggtggacgag
taccaggacaccaaccccatccaatttcgcatcacggacatgctggccaacaaacacaaa
aacatttgcgtctgcggtgacgatgaccagagcatctatgcgttccggggagcggacatc
cgaaacatcctggaattcgaaaagcactaccccaaagccaccgtcatcaaattggagcaa
aactaccgctccaccccaaacatcatcgaagctgccaatagtgtgatcaaaaacaaccag
ggacgcaaggacaagaagatgtggacggacaaggaaccgggagagctcatcgagatccac
gaactcaacgacgagcgggaagagagcaattttgtcaccaaccagatccgaagcatggta
cgctccgggttttatgagcataaggattttgccgtactctaccggaccaatgcccaaagc
cgggtgtttgaagaaagcttcatggcggcccaggtcccctacaagatggtgggaggcacc
aagttttacagccgccaggagatcaaggacatcatcgcttatctggtggtgctggacaat
ccccgggacgatctgagcctgaagcggatcatcaatacccccaagcgggggatcggcgcc
gccaccatcggcaagctggaagactttgccgagttcaagggttgggccctctatgatgtg
atcatgaacctggaccatatggtgggtctcacggctggcgtcatgaaaaagctggaagaa
ttctcggagctgatccgacactttgaggaaacaaaagagcatcaaaccattgctgccctt
atggaagaagttatggattcctccggctacatggacatgctggaaagcggaaaaatgcaa
aatgcccagtcccggatcgagaatctcaaggagctgatttctgctgccgtggaatttgaa
aagaattccgtggagaacgacttgaccgcatttttggaaaacgtctccctgttttcggaa
acggacaacattccggaagagggtggggaggtgctgctcatgacggtccacaacgccaag
ggactggagtttccggtagtgtttttgccgggaatggaggaagggatctttccccacgag
aggtccaaagaagacgaagtggaactggaagaggagagacgcctttgctatgtgggcatc
acccgtgcagagaaaaaactcttcatgacccatgccaggtatcgtaccgtatacggcaga
ctcagcgtcaacatgcgatcccgtttcctggacgagatcccggcagaactggtggaagtg
gtggaaacggaaaaaccggcggcaccggttcggaaacagcgggattcctacaactcctcc
ttcagcatgaacaagcagatggggcggttcattccagatggaaagaagagcagccaagcc
ccggaggagaagacggaaaaatcggcaggcccgggagctaaggtcatccacaaggtgtgg
ggggaaggaaccgtcatcgccatggacggggacatcgccaccattgcctttcccaacatg
gggatcaagaaagtggcgtggagcatggcgcccataaaaatagtgtag
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