Alkalibacter rhizosphaerae: J0B03_10415
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Entry
J0B03_10415 CDS
T07100
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
alka
Alkalibacter rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
alka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alka03019
]
J0B03_10415
03009 Ribosome biogenesis [BR:
alka03009
]
J0B03_10415
Messenger RNA biogenesis [BR:
alka03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J0B03_10415
Ribosome biogenesis [BR:
alka03009
]
Prokaryotic type
rRNA processing factors
J0B03_10415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
QSX08196
UniProt:
A0A974XEG6
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Position
2097576..2099036
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AA seq
486 aa
AA seq
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MSSIVIENLLGQNRIAVVGHGADAPLDHFFIERHSDWNSYGEIYIGRVDQIKAGMQVAFL
DIGADKNGLLHASDILPNPDKLPIEKLLKNGQEVLVQVKKEAVGTKGARLTTKFWLTGHY
LVLLPTEDRIFVSKKIKSKKQVEVFEELLADPIQDRYGVIVRTEAKEADPEAVLRELAYL
IRQWEKISRPIHKAPKLLFKDQGPIINTIRDYYSSAETEEIILNNNTHLEEIQTYFRSYF
PDDLDKIRMAGQLNVFEELNLEKKISELYARKVWLKSGGSVVIDTTEACTVVDVNSGKYT
GKKDPEETILKINLEATETIANQIRLRNISGIILIDYINIEREDHKNAVIKRWKELSYKD
KVRFQVVGFTELSILQITRKQQGKSVADLNRQICPMCNGTGDIYSQEAFFYKCLSKIEHD
MSLLEHNRYRIVISPHLYQVVKEMNYFQAGKTFDRMLEEYYKVKVYLEVDLSNEFDQVFI
LPVIDN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcatcgttatcgaaaacctgcttggtcaaaatcgaatcgccgtagtaggccat
ggagcggatgcgccattggaccactttttcatagaacgccatagcgattggaatagttat
ggggagatctacatcgggagagtggaccagatcaaggccggcatgcaggtggcttttttg
gatatcggagcagacaagaacggccttcttcatgccagtgacatcctgcccaatcccgac
aagctgcctattgagaagttgttgaaaaacggtcaggaggttttggtgcaggtcaagaag
gaagcagtaggtaccaaaggagccaggttgaccaccaagttttggttgacgggacactat
ctggtcttgcttccaacggaagatcggatctttgtatcgaaaaagatcaagagcaagaag
caggtcgaagtgtttgaggagttgctggctgatccgatccaagacagatacggcgtcatc
gtgcgtacggaagcaaaagaagcggatccggaagcggtacttcgggaattggcctacctg
atccggcaatgggagaagatctcccgtccgatccacaaggcaccgaaacttttgttcaag
gatcagggccctatcatcaacaccataagagactactattcatcagcggaaacggaagag
atcatcctcaacaacaatactcacctggaagagatccagacctattttcgaagctatttc
ccagacgatctggacaagatccgaatggcaggacaactcaatgtgtttgaagagttgaat
ctggaaaaaaagatcagtgagctgtatgccaggaaagtctggttgaaaagcggcggttct
gttgtcatcgatactacagaggcttgtacggtggtggatgtgaacagcggtaaatatacg
ggcaaaaaagatccggaagaaaccattctgaaaatcaatctggaagccacggagaccata
gccaatcagatccgattgcgaaacatcagcgggatcattctcatcgattatatcaacatc
gaacgggaagaccacaaaaatgccgtgatcaaacgttggaaagagctgtcctacaaagac
aaggtccgttttcaagtggtcggttttacagaactcagcattttacagatcacccggaag
cagcagggaaaatccgtagccgacttgaaccggcagatctgccccatgtgcaacgggaca
ggcgacatctacagccaagaagcatttttttataaatgcctttcgaaaatcgagcacgac
atgagtttgctggaacacaatcgctatcggatcgtcatcagcccccatctgtatcaggtg
gtgaaagagatgaactatttccaagccggcaaaaccttcgaccggatgctggaggagtat
tataaagtgaaagtttatctggaagtggatctaagcaatgagtttgatcaagttttcatt
cttcccgtaattgacaattga
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