Alkalibacterium sp. f15: ACO1PF_01545
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Entry
ACO1PF_01545 CDS
T11423
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
alkf Alkalibacterium sp. f15
Pathway
alkf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACO1PF_01545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alkf03400
]
ACO1PF_01545
Enzymes [BR:
alkf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACO1PF_01545
DNA repair and recombination proteins [BR:
alkf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACO1PF_01545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
UvrD-helicase
HHH_5
AAA
GAPS4b_N
nSTAND3
DEAD
T2SSE
AAA_22
SLFN-g3_helicase
AAA_29
AAA_28
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
XRI56751
LinkDB
All DBs
Position
complement(304073..306484)
Genome browser
AA seq
803 aa
AA seq
DB search
MQQLDFSNEKDSEEYIIGEIVAIYFSNPSNYYKVILVKIDSTNTKVKETQTIVTGNFGQI
QEGDPYKFFGKWTDHPKYGLQFLSTKYIKEKPSTEEAIITYLSSPRFRGIGKKSAEKIVE
TLGLESLDKILADESVLDTVPGLNQAKKSMLLSVLDKEQGMQKIIIALNNYGISNQLAYK
IYQRFEGETLSVIQSNPYKLIEEIEGIGFKRADSVAEEIGIEGDAPERIKAGILYTIEEQ
TMKSGDTYIEADFLLEKSLKILEDSRSFIINPDLIAGIIIELVDLQNIIQEENRFYLPSL
YASEWGIAGALERLMTSADEEILKEKAIDKKIKQFEKRRGITFGSSQKEAIRKALMSSVF
LLTGGPGTGKTTVLEVIVSVFADLHDLSLDPADYSNEPYPVILAAPTGRAAKRMKETTGL
PSSTIHRLLGLTGSEEDPMQESDRMLKGSLLIIDEMSMVDTWLAYQLLKSVPNDMKVIMV
GDKDQLPSVGPGQVLRDLISSEMIEKKELTEIYRQDDGSSIVSLAHEIKRGHIPVDFTGK
KKDRNFFPCGTNRVVEVVSLLVTKAIEKGYTAQDIQVLAPIYKGQAGIDNLNKNLQNLFN
PKDENTKEVEFKDKSYRIGDKVLQLINEPERNVFNGDMGIIQGIISSKESENNVEELVID
FDGNEVNYLRNEWNKITLSYCCSIHKSQGSEYPMVILPIVYGYGRMLKKDIVYTAITRAS
QTLLLCGEKSAFVKSVSENTTERLTSLSMRINSEKEKESITLKMTSRNKATKTIVEKKSY
VLTSSDIDRDSLDPMIGMEDIRP
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacaacttgatttttcaaacgagaaggactcagaagaatacatcattggtgaaata
gtagcaatctatttttctaatccatctaactactacaaagttatattagttaaaatcgat
tccaccaatacaaaggttaaagaaacacagacaatagtcaccgggaactttggacaaatc
caagaaggcgatccttataaattctttggtaaatggacagatcatcctaaatatgggctg
cagttcctatcgacgaaatatatcaaagaaaaaccatctaccgaagaagcaatcattact
tacctttctagcccgcgttttaggggaatcggtaaaaaatcagctgaaaaaatagttgaa
acactaggtcttgaaagtttagataaaatattagcagatgaaagtgttttggacactgtc
cccggattaaatcaagcaaaaaaatcaatgctgctttctgtactagataaagaacagggc
atgcagaaaatcattattgctttaaataattatggcatatcaaaccagcttgcgtataaa
atataccagcgatttgaaggcgaaaccttatcagttattcaatctaatccatataaatta
attgaagaaattgaaggtatcggttttaagcgagcagattcggtagctgaagaaattggt
attgaaggagatgctccggaacgaatcaaagcaggtattttatatacaattgaagaacaa
accatgaaatctggagacacatatattgaagcggatttcctattggaaaagagtttgaaa
atacttgaggatagtcgttctttcattataaatccagatttaatagctggaattattata
gaattagttgatttgcagaacatcattcaagaagaaaatcgcttctatttgccttcttta
tatgcttctgaatggggcattgccggcgcattagaaagattgatgacgagcgcagatgaa
gaaatattaaaagaaaaagctatcgacaaaaaaatcaagcagtttgaaaaacgtcgaggg
ataacattcggatcatctcaaaaagaagcgataagaaaagcattaatgtcttcagttttt
ttattaacaggaggacctggtactggtaaaacgacagtgttggaagttatagtttctgtt
ttcgctgatttacatgatttaagtctggatccagctgattattccaatgaaccttaccct
gttatattagctgcaccaaccggacgcgcggccaaacggatgaaagaaacaacgggccta
ccatcgagcaccattcatcgattacttggcttaacgggttctgaggaagacccaatgcaa
gagtcagatcgaatgttgaaaggctccttattgatcattgatgagatgtctatggtggat
acgtggttagcctaccagctgttgaaatcagttcctaatgatatgaaagtcataatggtc
ggggataaagatcagttgccttctgtaggtcctggtcaggttttgagagatttaatttca
agtgaaatgattgaaaaaaaagaattgactgaaatttaccgtcaagatgacgggtcctct
attgtttcattagctcacgaaataaagagaggtcatattccagtagattttactggtaaa
aaaaaggaccgtaattttttcccgtgcggtacaaaccgcgttgttgaagtggtctcttta
ctggttaccaaagcaattgaaaaaggttatacagcgcaggatattcaagtacttgctcct
atatataaagggcaggccggaatagacaacttaaataaaaatcttcaaaacttatttaat
cctaaagatgaaaatacaaaagaagttgaattcaaagataaatcttaccgaattggtgat
aaggtattacaactcattaacgaaccggaaagaaatgtgtttaacggagatatgggcatt
atacaggggatcatctcatccaaagaatctgaaaataatgtggaagaattagttatagat
tttgatggtaatgaagtgaattatcttagaaatgaatggaataaaataactctttcatat
tgttgttctattcataaatcacagggaagcgaatacccgatggtaattctacctatagta
tatgggtacggaagaatgttgaaaaaagatattgtttacacagctataacacgagcaagt
cagacgttacttttgtgtggagaaaaatcggcttttgttaaaagtgtttcagagaataca
acagaacgattaacctcattatctatgcggatcaatagtgaaaaagaaaaagagtctata
acactaaaaatgacctctcgaaataaagcgactaaaaccattgttgaaaagaaaagttat
gtattgacttcatctgatatagatcgtgattcgcttgatccgatgattggaatggaagat
attagaccttga
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