KEGG   Alkalibacterium sp. f15: ACO1PF_02705
Entry
ACO1PF_02705      CDS       T11423                                 
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
alkf  Alkalibacterium sp. f15
Pathway
alkf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:alkf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACO1PF_02705 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alkf03019]
    ACO1PF_02705 (recQ)
   03400 DNA repair and recombination proteins [BR:alkf03400]
    ACO1PF_02705 (recQ)
Enzymes [BR:alkf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ACO1PF_02705 (recQ)
Messenger RNA biogenesis [BR:alkf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ACO1PF_02705 (recQ)
DNA repair and recombination proteins [BR:alkf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ACO1PF_02705 (recQ)
SSDB
Other DBs
NCBI-ProteinID: XRI56952
LinkDB
Position
complement(524247..526421)
AA seq 724 aa
MKSIFETLKHYYGYDAFRPGQQELIEAILRGEDVLGVMPTGGGKSICYQIPAIFMDGLTL
VISPLISLMKDQVDSLQTIGVRAAYINSQLTYFEQQSIMEQASKGELDLLYVSPERLGNQ
QFMSHARRWKLNLIAVDEAHCVSQWGHDFRTSYQRIPELMGVLSSRPPFAAFTATATKIV
QEDMIKQLRLEKPFKHVASFDRPNLYFSVVKPKKKANELLRIMDKKESSIIYCNTRKSVD
KVYSTLDKKGYPVTYYHAGISAEERTNHQEDFLYDRKPIMVATNAFGMGIDKSNVRRVIH
YNMPLDMESYYQEAGRAGRDGAPSEAILFYSAQDIITNTMLIEQGNSPHARANLNSMITY
CKTGNCLRKSILKYFDQEVDWQECDYCSNCDGESVTTDITVESQKILSCIYRMKQAYGTG
LITDVLRGKNNKRIQQLGFNELSTHGLMSDYTDGDIKDMISIMLSEGYLRLNGDSYPIVQ
FTEKTNDLLQAKVSLSIRKQLKQEPAPKNKMVENIEHYDEDLYEELRKLRTKLAQEAGKP
PFIVFTDRSLIDMAAKYPLTENDFLNINGVGDVKLQEYGEVFLTIIKDYVSSHKLDAETL
KQNNVKTEKISQPQKTSKIGQSKNTIEETVTSFEEGQTIDEIAEMRNLSTMTIVNHICKW
IEKGKEIDLDRFVSPETDKEIREAILKVGRDFLKPIKEAMDDSITYDQIKVVLAKIKAEE
STAK
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgaaaagtatttttgagacactgaaacactattatggttatgacgcattccgacctgga
cagcaggaactcattgaagccattctcagaggagaagatgtgctgggtgtcatgcctaca
ggtggcgggaaatcgatatgttaccagattccagctattttcatggacggtttgacttta
gtcatttcgcctttgatttcattgatgaaagatcaagttgacagcttgcagacgataggc
gtcagagccgcttatataaacagtcaactgacttattttgaacagcagtcgattatggag
caggcatcaaagggagagttagatctactttatgtttctcctgaacgtctgggaaaccag
cagtttatgtctcatgcccgcaggtggaagctcaatcttatcgccgtggacgaggcccac
tgtgtttctcagtggggacatgatttcagaacgagttatcaacggattccagagttgatg
ggcgtattatcctcgcgtccgccatttgcggcttttacagcaacggccacgaaaatcgtt
caggaagatatgatcaagcaattgagattggaaaaaccgttcaagcacgtcgccagtttt
gaccgaccgaatctctatttctctgtcgttaagccgaaaaagaaggcaaatgagctatta
cggataatggataagaaagaatcgagcatcatttattgtaatacacgtaaaagcgtggat
aaagtttacagcacacttgacaaaaaagggtatccggtaacgtattaccatgcagggatc
agtgcggaagaaagaacgaaccatcaggaagattttctatatgaccgaaaacccattatg
gtagcgacgaatgcttttggaatgggcatcgataaatcaaacgttaggcgtgttattcat
tataatatgccgctcgacatggaaagttattaccaggaagccggtcgtgccgggagagac
ggagccccatcggaagccattctattttattcagcccaagacattattaccaatacgatg
ctgatcgaacaagggaattcccctcatgcacgagcgaatctgaactcgatgatcacatat
tgtaaaaccggtaactgcctgcgtaagagtatactgaaatacttcgatcaggaagtggat
tggcaggaatgtgactattgctcaaactgcgacggagagtctgtcaccacggatatcacc
gttgaaagccagaagattttatcgtgcatctaccgtatgaagcaagcatacggaaccgga
ctcataacggacgtcctccgtgggaaaaacaataaacgtatccagcagttgggattcaac
gaattgagcacgcatggtttaatgtctgactatacagacggggacatcaaagatatgatt
tccattatgttgagtgaaggctacctacgtttaaatggcgacagctatcccatcgtgcag
tttacggaaaagaccaacgatctgctgcaggccaaagtgagtttatccatacggaaacaa
ctgaaacaagagccggctccgaagaacaagatggtcgagaatattgaacattatgatgaa
gatttatatgaagaactgagaaaattacggacaaaacttgcccaagaggcaggtaaacca
ccattcattgtttttactgaccgcagtttgatcgatatggcagcgaagtatcctctgaca
gaaaacgactttttaaatataaacggtgtaggcgatgtgaaattacaggaatatggtgag
gtattccttactatcattaaggactacgtttctagtcataagctagatgctgagaccttg
aaacaaaacaatgtgaaaacagaaaaaatcagtcagccacagaagacgtcaaaaataggt
caatctaaaaatacaatagaggaaacagtcactagttttgaagaaggacagacgattgac
gaaattgctgaaatgagaaacttgtcaacgatgaccatagtgaatcatatatgcaaatgg
atcgaaaaaggaaaagaaatagatcttgaccgattcgtttcacctgaaacagataaagaa
ataagagaagccattctaaaagttgggagagactttctcaaacctatcaaagaagcaatg
gatgactccataacgtatgatcaaattaaagttgtactggccaaaataaaagctgaagaa
agtactgcgaaataa

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