Alkalibacterium sp. f15: ACO1PF_06490
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Entry
ACO1PF_06490 CDS
T11423
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
alkf Alkalibacterium sp. f15
Brite
KEGG Orthology (KO) [BR:
alkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alkf03400
]
ACO1PF_06490 (radA)
DNA repair and recombination proteins [BR:
alkf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACO1PF_06490 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
DUF7125
AAA_16
AAA_22
nSTAND_NTPase5
ABC_tran
AAA
AAA_14
SLFN-g3_helicase
AAA_30
AAA_24
Zeta_toxin
nSTAND3
AAA_5
Rad51
NTPase_1
RUBY_RBDX
KdpD
RecA_N
NPHP3_N
GvpD_P-loop
ATPase_2
MeaB
KTI12
DZR
MCM
CbiA
NACHT
AAA_19
SRP54
AAA_31
CobU
DAP3
Motif
Other DBs
NCBI-ProteinID:
XRI55375
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Position
1314629..1316002
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AA seq
457 aa
AA seq
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MAKKKATVFVCQNCGYELPKYLGKCPSCNAWNQMVEEKLPDKTDSRSRVTMSGKKSKAVP
ITSITIENEERVKTQMVEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSAQLNQQGGK
VLYVSGEESTSQIKMRAERLELRGSDFYIYTETEVSAIAETIETLKPDYVIIDSIQTMHH
VNIDSASGSVSQVRESTSTFMQIAKMNGIAIFIVGHVTKEGSIAGPKMLEHMVDTVLYFE
GEQHHTFRILRAVKNRFGSTNEIGIFEMRNGGLEEVLNPSQLFLEERLAGATGSAVVAAM
EGTRPILVEIQSLIAPTVFGNAKRTASGLDHSRVSLILAVLEKRTGLLLQNQDAYLKAAG
GVRLDEPAIDLAIAISIASSYKEKETRPTDCFIGEIGLTGEIRSISKIEQRVKEAAKLGF
KRVFIPKNNIDNGWDMPKNIEIIGCTTLSEAIKRAFS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaaagaaagcaactgtatttgtttgtcaaaactgtgggtatgaattacccaag
tatttgggtaaatgcccgagttgtaatgcctggaatcagatggtcgaagaaaaactgccg
gacaaaaccgatagtcgaagtcgggtgaccatgtcaggcaaaaaatctaaagcagtaccg
ataactagcatcaccatagaaaatgaagaacgcgttaaaactcaaatggtggagtttaat
cgtgttttaggcggcggagtcgttcctggttcgcttgtattgattggtggcgatcctggt
atagggaaatcgacactgcttctacaagtgtctgctcaactcaaccagcaaggagggaaa
gtcctctatgtttccggtgaagaaagcacgtctcaaatcaagatgagagctgagcgctta
gagctaagagggtctgatttttatatctacactgaaacggaagttagcgccatcgcagaa
acgattgaaacattaaaaccagattatgtcattattgactcgattcaaacgatgcatcat
gtgaatattgatagtgcttctggaagtgtctctcaggttagagagtcaacgtctacgttc
atgcagatagcgaagatgaacggtatagccattttcattgtgggtcatgtaaccaaagaa
ggttccattgccggtccgaaaatgcttgagcatatggttgatacggtgctttactttgaa
ggtgagcagcaccatacctttagaattctaagagccgtcaaaaaccgatttggttcaacc
aatgaaatcggtatctttgaaatgcgaaacgggggactagaagaggtcttgaacccctct
cagctctttttggaagaacgattagcgggagcgactggctctgctgtcgtggcagctatg
gagggtacacgaccgatcctggtcgaaatacagtcacttattgcacctactgtttttgga
aatgcgaaacgtaccgcaagtgggttggatcactcgagagtttcacttattttggctgta
ttagaaaaacggacaggtttacttttgcagaatcaagacgcctatctaaaagcggcaggt
ggtgtacgcctggatgaaccagccatcgatctagccattgccattagcatagcttccagt
tacaaggaaaaagaaacgagaccaacggattgttttatcggcgaaattggcttgactggt
gaaatacgaagcatttctaaaatcgaacagcgggtcaaagaagcggcaaaacttgggttt
aaacgggtgttcatccctaaaaacaatatagataatggttgggatatgcctaaaaatata
gaaatcatcggatgtaccaccttatcagaagcgataaaacgtgcgttttcttaa
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