Alkalibacterium sp. f15: ACO1PF_11295
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Entry
ACO1PF_11295 CDS
T11423
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
alkf Alkalibacterium sp. f15
Pathway
alkf02020
Two-component system
alkf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
alkf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACO1PF_11295
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACO1PF_11295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alkf03021
]
ACO1PF_11295
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
alkf02035
]
ACO1PF_11295
Transcription machinery [BR:
alkf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACO1PF_11295
Bacterial motility proteins [BR:
alkf02035
]
Flagellar system
Flagellar assembly proteins
Stator
ACO1PF_11295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XRI56283
LinkDB
All DBs
Position
2398552..2399268
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AA seq
238 aa
AA seq
DB search
MEEKQRNETVIQYMPLIHKVVHGLKINNKDYEHEDLVNIGVIGLMKAIEKYDVSLNVPFI
NYAYMRIKGAIIDEIRKTSRVSRGKIKAVNNYYDAVSKLQQQLLRTPTDKELCRYLEMTD
KELKKVYETVHQLADVSLDSILFEDSTNETNLIEVMTNDSAPDTETSVIKKEQLNYMKQA
ITKLPEREQQILQLIYFEELSMKEVAYIYDISTPRVSQIHGKALLKLRESLGKVYDND
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaaaaacaacgaaacgagacagtgattcaatatatgccattaattcataaagtt
gtgcatggtttgaaaatcaataataaagattatgaacacgaagacctcgtcaacatcggc
gtcattggtctgatgaaagccattgaaaaatatgatgtttctttaaatgtcccgtttata
aattatgcttatatgcgaatcaaaggcgccatcatcgatgagatcagaaaaacgtctcgt
gtttctcgcggtaaaatcaaagcggtcaataactattatgacgcggtcagcaaattgcag
cagcagttacttcgaacacctacagacaaggaattatgccgatatttagagatgacagat
aaagaactgaaaaaagtatatgagaccgtccatcaactggcggatgtttcactggattct
atcttgttcgaggattccaccaatgaaaccaatcttatagaagtgatgacaaacgattca
gctccggacacagaaaccagtgtgataaaaaaagaacagctgaattatatgaaacaagcc
atcaccaaattaccagaaagagaacagcagatcctccaactaatttactttgaggaatta
agcatgaaagaagtggcctatatttatgacatttcgacaccaagagtttctcaaatccat
ggtaaagcgttactcaaattaagagagtctctaggaaaggtgtatgacaatgattag
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