Alkalihalobacillus sp. AL-G: MOJ78_03340
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Entry
MOJ78_03340 CDS
T09526
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
alkg
Alkalihalobacillus sp. AL-G
Brite
KEGG Orthology (KO) [BR:
alkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alkg03009
]
MOJ78_03340 (rlmD)
Enzymes [BR:
alkg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MOJ78_03340 (rlmD)
Ribosome biogenesis [BR:
alkg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MOJ78_03340 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
Cons_hypoth95
TehB
Ubie_methyltran
NARF
Motif
Other DBs
NCBI-ProteinID:
WLD93965
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All DBs
Position
657561..658946
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AA seq
461 aa
AA seq
DB search
MKTKDVHVKTGDKIPVTIKRLGINGEGVGFYKKKVTFIPGALPGEEVIAKVDKSFPNRIE
ANLATIKKRSDDRVKPPCPIYEECGGCQLQHLKYEAQLREKKDIVRQAFQRYTSYNAHHI
PLKDTIGMEDPWNYRNKSQLQVAKKEAGVIAGLYGIGSHKLIDLTNCMVQHPETSNVTNV
IKSILGDLNISIYNERKRTGMVRTIVTRVSFQTKQVQVVLVTAERNLPKKDLLIQEIKSR
LPQVVSLLQNINGQKTSVIFGDKTIHLEGGETIQETLGDLSFELSARAFFQLNPIQTVKL
YNQVRRAAKLTGVEKVVDAYCGVGTIGLWLAKDAKEIRGMDVIQDSIRDASENAIKHGYS
NADYVTGKAEYWLPKWLKEGWKPDVIVVDPPRTGCDQTFLQTVAKIKPKKLVYVSCNPST
LAKDVNFLSESGFKIQSLQPVDMFPHTSHVEVVAALTLNKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaaggatgtacatgtaaaaacaggagataagatccccgttacgataaaaagg
ctaggcatcaatggagaaggtgtcggattttataaaaagaaagttacattcattcctgga
gcccttccaggggaagaggttatagcgaaagttgacaaatcctttccaaatcggatcgaa
gcgaatttagccactataaagaaacgatcagatgaccgggtaaaacccccatgtccgatt
tatgaggaatgtggaggctgtcagttgcagcatcttaagtatgaagctcagcttcgcgaa
aagaaggatattgttcgtcaagcatttcagcggtatacgagttacaatgcccatcatata
ccgttaaaagatacgattggaatggaagacccttggaactaccgaaataaaagtcagctt
caggtggctaaaaaagaggcgggagttattgcgggactttatggtatcggatctcacaag
ctgattgatttgacgaattgtatggtccagcatcccgaaacatcgaatgtcacgaatgtg
atcaaatcgattctgggggatctgaacatttcgatttataacgaaagaaaacgtacaggg
atggtcaggacgattgtaacgcgagtgagttttcaaaccaaacaggtacaggttgtccta
gtaacggccgaacgtaatcttcctaaaaaagacttgcttattcaggagattaaaagtcgc
ttgccacaagtcgtttctcttttacaaaacattaacggacaaaaaacatcggtcattttc
ggagataaaacgatccatttggaaggcggagaaacaatccaagagacacttggtgatctt
tcatttgagttatccgcaagagccttttttcaattgaatccaattcaaacggtaaaatta
tataaccaagttcggagagcggcgaaactgactggtgtagaaaaagtagttgatgcatat
tgtggagttggaacgatcgggttgtggctagcaaaggatgcaaaagaaatacgcggaatg
gatgtcattcaggattcaattcgggatgcctccgaaaatgccatcaaacatggctattcg
aatgctgactatgtaacgggtaaagcagaatattggcttcctaaatggctgaaggaaggc
tggaaacctgacgtcatcgtggtcgatcctcctcggacaggctgtgaccaaacgttttta
caaacagttgcgaaaatcaaaccgaaaaaattggtttatgtatcatgtaacccatcaacc
ctagcaaaagacgtcaatttcttatctgaatcaggattcaaaatacaaagtttacagcct
gtggatatgttcccgcatacgtcacatgttgaagtagttgcagccttaactttaaacaaa
aaatag
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