Alkalihalobacillus sp. AL-G: MOJ78_08140
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Entry
MOJ78_08140 CDS
T09526
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
alkg
Alkalihalobacillus sp. AL-G
Brite
KEGG Orthology (KO) [BR:
alkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alkg03400
]
MOJ78_08140 (addB)
Enzymes [BR:
alkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MOJ78_08140 (addB)
DNA repair and recombination proteins [BR:
alkg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MOJ78_08140 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WLD94837
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All DBs
Position
1571637..1575137
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AA seq
1166 aa
AA seq
DB search
MSIRFKIGRAGSGKTTSCLEELRERLKKEPHGKPLIFLVPDQMTFQMEYELIKTPGLGGM
IRSQVFSFSRLALKVLQEVGGLTRYHLNSTGMNMLLRKVVEKNKDDLRLFQKSTDQPGFY
EQLEEMITEFKRYCLSSDDLESFAMNFFNGKEDRKLLADKLHDVHIIYQRLEELVADKYI
DSEDYLRLFEERIPDSTYLNDCEIWVDGFHSYTPQELGVLAALMRKAKQMTITVTLDHPR
ENTPSDLDLFRMTTATQQKLQEMAQEAGVQVDSCDVLNQFPKFGDTPSIRHVENYYHERP
VVPFYGESSVTLSGAVNRRAEIEGVARDIQDLVQNKGYRYKEIAILVRDASSYSDLLDTI
FVDYEIPYFLDQKRSMLHHPLIECIRSSIDVILQNWRYDAVFRCVKTDLLFPFDENRSTR
QFREQVDQLENFVLAHGIHGKKHWTSKKDWVYRKYRSLDQSFGSQTDEERNKQLMINDAR
QMIADPLARLERDLKSAKNGKQLCEALFLYLEDLRAPAKLEEWRYQAEKEGALSLAREHD
QVWGAVIDLLEQMVEIAGNEPIGLELFSKMLDTGLESMRFALVPPSIDQVLIGSLDRSRL
YNVKCSFVIGVNDGILPAKPKEEGIFSEDDREKLLEQGVELAPTARQSLLDEPFLIYNAM
SSASDYLFVSYPLADEEGKSLVPSILMNQLKELFPEQKERLLMQEPGDGEESDDRFIVRP
ARTLSYLTVQLRQWQKGYPVSSIWWDVYNWFVENERWSDTAKRTVHSLFYVNKAEQLTKK
TSQELYGDHLKASVSRMEKHQSCPFSHFASYGLKLEERPLFRLEAPDIGQLFHAALKEVA
DYLKQRNIDWQELSAKDCYRIAGEMVERLAPMLQSQILLSSNRYNYIKRKLKNVVGRAAY
VLSEQAKASGFSPVGLELGFGMGDQLPPLKYTLPNGSTMEVIGRIDRVDAAESSDGLVLR
VIDYKSSQRGLNLAEVYYGIALQMLTYLDVVLTYSDTWMGKTAKPAGVLYFHVHDPVHSS
KKLLTPEEIEKELFKKFKMKGLVLEDEEVVQLMDDTIDGHSSIIPVATKKGGGFQKRSSV
ISHEQFDEVRSYVRSMIGSIGTEITDGKIDISPYEIRKRTPCTFCSYRSVCQFDQSLDEN
NYRTLINIKDEEAFEGMRKKEGQDDA
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccgatttaaaataggaagagcaggaagcggtaagaccacttcttgtttagaa
gaacttagagagcggctgaaaaaggaacctcatggaaagccgcttatttttctcgtgcca
gaccaaatgaccttccagatggaatatgagctgattaaaacgcctgggctcggcgggatg
attcgttcacaagtattcagtttttcaagacttgcacttaaggttttgcaagaggtcggt
ggactgacgagatatcatttgaattcgacagggatgaacatgctccttagaaaagtggtt
gaaaaaaacaaggatgatcttcggctttttcaaaaatcgacagatcaaccaggtttttat
gaacaattagaagagatgatcacagaatttaaacggtactgtttatcttcggatgatctt
gaatcgtttgcgatgaacttttttaatggaaaagaggatcggaagctgttagcggacaag
ctccacgatgtacatattatttatcaacgcttagaagaattggtagccgataaatatata
gattcagaggattatctacggttgtttgaagaaaggatacctgattcaacgtacttgaat
gactgtgagatctgggtagatggatttcatagttatacaccacaggagcttggggtgctt
gccgccttaatgcgaaaagcaaagcagatgacgattacagtgacactggatcaccctcga
gagaacactccatctgaccttgatttgttcaggatgaccacagcaacgcagcaaaagctt
caagagatggctcaagaagctggtgttcaagtagattcctgtgatgtattgaatcaattt
ccgaagtttggtgatacaccatcgattcgacatgtggagaactattatcatgaacgtccg
gtggttcctttttatggtgaaagctcagttacattaagtggggctgtcaatcgaagagca
gagattgagggtgttgctcgagacatacaggatcttgtacagaacaaaggctaccggtac
aaggaaattgcaatattagtacgtgatgcctcaagctattcagatttattggacacgatt
tttgtagattatgagattccgtatttcttagatcaaaaacgttcgatgcttcatcaccca
ttaatcgagtgtattcggtccagcatagacgtcatattacagaattggcgctatgatgct
gtattcaggtgtgtaaaaactgacttattgtttccgtttgatgaaaaccgatcgacaaga
cagttccgagaacaggtcgaccagcttgaaaactttgtattggcgcacggaattcatggg
aaaaagcattggacaagcaagaaggactgggtgtatcgaaagtatcgatccctagaccag
tcgtttggcagccagacagatgaagagcgtaataagcaattgatgattaatgatgcaaga
caaatgatcgccgatccgctagcaaggcttgaacgcgatcttaaaagtgccaaaaatgga
aagcagctttgtgaagcactctttttatatcttgaagacctgagagcacctgcaaagctt
gaagaatggcgttatcaggctgaaaaagagggggcactgagcctcgctagggaacatgat
caggtttggggagctgtcatcgatttacttgaacagatggtcgaaatcgctgggaacgag
ccgataggtttagagcttttcagtaaaatgcttgacactggattagaatctatgagattt
gcactcgtaccaccttccatcgatcaagtattaatcggaagtcttgatcgctcgagatta
tacaatgtcaaatgtagctttgtgatcggtgtaaatgatggcatattgcctgcaaagccg
aaagaagagggaatcttttcggaagacgatcgcgaaaaattgttggagcaaggggttgaa
cttgcaccaactgcaagacaatccttactggacgaaccgtttttgatttataacgctatg
agcagtgcttctgattatttatttgtatcctatcctcttgcagatgaagaaggaaagtcg
ctcgttccgtccattttgatgaaccagttgaaggaattatttccggagcaaaaagaacgg
ttactcatgcaagagcctggcgacggtgaggagtcagacgatcgttttatcgttagaccg
gcacgtacgttatcgtatttaaccgttcagcttcgtcagtggcaaaaagggtatccggtt
tcatcaatttggtgggatgtttacaactggtttgtggagaatgaacgttggtcagacaca
gctaaacgtactgtacacagccttttctatgtgaataaagctgagcagcttaccaaaaag
acaagtcaagaattatacggtgaccatttaaaagcaagtgtatcacggatggaaaagcat
caatcctgtccattttcacattttgcaagctacgggttgaagctggaagaacggccatta
ttccgccttgaagcaccggatatcggtcaacttttccatgccgctctaaaagaggtcgca
gactatcttaagcagcgtaatatcgactggcaggagctatccgctaaagattgctatcga
atcgcaggtgaaatggttgaaagacttgcaccaatgcttcagagtcaaatcctgctaagc
tcaaaccgttataactatatcaagagaaaattaaaaaatgtcgtcggtcgagcagcctat
gttttaagtgaacaagcgaaggcaagcgggttctcaccggtaggacttgagcttgggttt
gggatgggagaccaactaccaccattaaaatatacacttccgaatggatcgacaatggaa
gtgatcggcagaattgatcgggtcgatgcggcagaaagcagcgacggactagtccttcgt
gtcatcgactataaatcgagccaaagaggcttgaatcttgctgaggtttattatggcatc
gccttacaaatgctgacgtatctcgacgtcgtattaacctattcagatacatggatggga
aaaactgcaaagcctgcaggcgtgttatatttccacgtacacgatcccgtccattcgtcg
aaaaaactgcttacgcctgaagaaatcgagaaggagctgtttaagaaatttaaaatgaaa
gggcttgtgctcgaggatgaagaagttgttcaattgatggacgatacgatcgatggacat
tcaagcatcattccggtcgcaacgaaaaaaggcgggggctttcagaagcgttcctctgtc
atcagtcatgaacaatttgatgaggtgagatcttatgtacgttcgatgattggttcgatc
ggaacagagattacagatgggaaaatcgacatatcaccatatgaaatccgcaaacgaaca
ccgtgtacgttttgctcataccgctctgtgtgccaatttgatcaatctcttgatgaaaac
aattatcgtacgttgattaatataaaagatgaagaagcatttgagggaatgcgtaagaaa
gaaggtcaagacgatgcgtga
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