Alkalihalobacillus sp. AL-G: MOJ78_10550
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Entry
MOJ78_10550 CDS
T09526
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
alkg
Alkalihalobacillus sp. AL-G
Pathway
alkg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MOJ78_10550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alkg03019
]
MOJ78_10550
03009 Ribosome biogenesis [BR:
alkg03009
]
MOJ78_10550
Enzymes [BR:
alkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MOJ78_10550
Messenger RNA biogenesis [BR:
alkg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MOJ78_10550
Ribosome biogenesis [BR:
alkg03009
]
Prokaryotic type
rRNA helicases
MOJ78_10550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_19
UbiD_C
Motif
Other DBs
NCBI-ProteinID:
WLD95286
LinkDB
All DBs
Position
2063242..2064747
Genome browser
AA seq
501 aa
AA seq
DB search
MAIPKKELTDLTTFKDLGIQTRTLKAISEMGFEEPTPIQKDAIPAALEGKDLIGQAQTGT
GKTAAFGIPMIENIDKESGKIQALIVTPTRELAIQVAEEMNRIGHHKRIRTLPIYGGQQI
HLQIKALKKRPEILVGTPGRLLDHLKRKTIRLNDLKTVVLDEADEMLNMGFIDDIKEILG
QIPSEHQTMLFSATMPRAIKSLADQFMKQERVIVQVKASEMTVQKIDQRYIKMHEKEKFD
VLCRLLDIQAPELAIVFGRTKKRVDEVADALIKRGYSADGIHGDLTQQKRDRVMKKFKAG
RIDILVATDVAARGIDISGVSHVYNFDIPQDPESYVHRIGRTGRAGKSGMALTFMTAREF
DHLKTIEKITKRRMEKMEVPSSNEALEGQQRVAADQLTESVHSDDLTSYHSVADELLNNH
DARDLVAAALKNMTKETDKTPVEITSLKPLDTKRKSNNRRQGGPQRGKQGQGQGRPYNRS
NNRSNNNKNKRSHRSYRQRVK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcgataccaaaaaaggagttaacagatttgacaacatttaaggatttaggtattcaa
acaagaacattaaaggcaatcagcgaaatgggattcgaggaaccaacgccaatccaaaag
gatgcgataccagccgcattagaaggaaaagacttgattggtcaagcgcaaacaggtaca
ggtaagactgccgcttttggaattccgatgatcgaaaacatcgataaagaatccgggaaa
attcaggcactcatcgtaacgccgacacgtgaacttgctatccaggtagcagaagaaatg
aacaggatcggacaccataaacgaatccgtacattacctatttacggaggacaacagatc
caccttcagattaaggctttgaaaaaacgaccggaaattctggtcggtacaccaggtcgt
ctactcgatcacttaaaaaggaaaaccattcgactcaatgacttgaaaacagttgttctc
gatgaagcagatgaaatgttgaacatgggattcattgatgatatcaaagaaattctcgga
cagatcccatctgaacaccaaaccatgcttttctctgcaacaatgccacgtgcaatcaag
agcttagctgatcaattcatgaaacaagaacgtgtcattgttcaggttaaagctagtgaa
atgacggttcaaaaaatcgatcaacgctacattaaaatgcatgaaaaagaaaaatttgat
gtattatgccgtctgctcgatattcaggcaccggaattggcgattgtgtttggacgtaca
aagaagcgtgttgacgaagtcgcagatgcactgatcaaacgtggttattctgctgacgga
atccatggcgatctgacacagcagaaacgggatcgtgtcatgaaaaaattcaaggcgggt
agaatcgatattctcgtcgcaacggatgtagcagcccgcggtatcgatatttctggtgta
tcccatgtttacaacttcgatataccacaggatccagaaagctatgttcacagaatcggt
cgtacaggacgtgcagggaagtccggaatggcactcacgtttatgacagcaagagaattc
gatcaccttaaaacgattgaaaaaatcactaaacgccgcatggaaaaaatggaagtaccg
agttctaatgaagcacttgaaggtcaacaacgcgttgcagcggatcaactgactgaaagt
gtgcattcagatgatttgacttcgtatcattctgttgcggatgaacttttaaataatcat
gatgcgcgcgatttggttgcggcagcattaaagaatatgacgaaagaaacggataaaaca
cctgtagagatcacatccctgaagccgcttgatacgaagcggaagtcgaataaccgacgc
caaggcggtcctcaacgtggtaaacaaggtcagggtcaaggcagaccctataatcgttca
aataaccgctctaacaataataaaaacaaacgatcacatcgatcatatcgtcaacgagtt
aaataa
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