Alkalihalobacillus sp. AL-G: MOJ78_11300
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Entry
MOJ78_11300 CDS
T09526
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
alkg
Alkalihalobacillus sp. AL-G
Pathway
alkg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MOJ78_11300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alkg03019
]
MOJ78_11300
Messenger RNA biogenesis [BR:
alkg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MOJ78_11300
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WLD91632
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Position
complement(2209506..2211167)
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AA seq
553 aa
AA seq
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MKKASPIKLFALGGLGEIGKNMYGLQYENEMIIIDCGIKFPDEELRGIDYVIPDFTYLEK
NKHLIKGVFITHGHEDHIGSIPFLLKRLNVPIYGGKLSVGFIKAKLEEHNLLRNAKLTTV
DEHSRIEFDNLSVRFVRTSHSIPDSFAISVTTPYGNIVHTGDFKFDLTPEGGSYDIGKIA
EIGNEGVFCLLSDSTNSEIPGFSLSEAAVKETLFDIVDHIDGRIIFATFASNIYRLQQAI
EASIAFNRKVAVFGRSMERSIRIGRELGYILASDDTFISGHELNKYPSNQVTILCTGSQG
EPMAALGRIANGVHRQIQVIPGDTVIFSSSPIPGNATKVYKLIDQLERIGANVIHNKMSD
IHTSGHGTQDEQKLMIRLLKPKNFVPIHGEYRMLVHHVKSAINCGVHEENTFILDNGDIL
ELNNESGKVAESFSANPVYVDGTGIGDIGNIVLRDRRLLSLCGTVIVTVTIDSKSAQLLS
GPALVSRGFVYMKESVELLSEAERLVEKEVKALLDEGVTQWTDLKKKISDLLTSYFFEQT
KRNPMILPIIMEV
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagcttcccctattaagttgtttgcactcggtggacttggtgagatagggaaa
aacatgtatggactgcaatatgaaaatgaaatgattataattgattgtggaatcaaattt
cccgatgaagaattacgtggaatcgattatgtcattcctgattttacgtacctagaaaaa
aacaaacaccttatcaaaggtgtattcatcacccatggacacgaggatcacatcggatcg
atcccctttctattaaagcgtttaaatgtacctatctacggtgggaaattatctgtcgga
ttcattaaagcaaaactcgaagaacataatttacttcgaaatgcaaagctgacaactgtt
gatgaacactctagaattgaatttgacaatttatcggtacggttcgttcgaacgagtcac
agtatcccagattcgtttgcaatcagtgtaacgaccccgtatggaaacattgtgcatact
ggggacttcaagtttgatttaactcctgaaggcggttcttatgatatcggaaaaatcgct
gaaattggaaacgaaggtgttttctgtttactgtcagatagcacaaacagtgaaattcct
ggtttttccttatctgaagcagcagtaaaagaaacattgtttgatattgttgatcatatt
gatggcaggattatttttgcaacgtttgcatcaaacatctaccggttgcaacaagccatt
gaagcttccattgcttttaatcgtaaagtagcagtgtttggcaggagcatggaacggtct
attcgtattggccgggagctaggatatatcctagcatccgacgatacgttcatctcagga
catgaattaaacaagtacccttcaaatcaagttacgattttatgtacaggcagtcagggt
gagcctatggctgcattgggccgaattgccaatggggtacatcgtcagattcaagtcata
cctggggatacggtaatcttctcctcttctcccattcctggtaacgcaacgaaagtatac
aagcttatcgatcaacttgaacggatcggggcgaatgtcatacataacaaaatgagtgac
atccatacatccggacatggaacccaagatgaacagaagttgatgatacgtttattaaag
ccgaaaaatttcgtgccaatccatggggaatatcggatgctcgtccatcatgtaaaatct
gcgatcaactgtggtgtacacgaagaaaatacctttatcttagataacggggatatcctc
gaactaaacaatgagagtggaaaagtagcagaatcattttctgctaatccggtctatgta
gatggaactggaatcggtgatatcggaaatattgtcttacgggatcgtcgtcttctttcg
ttgtgtggcacagtcattgtaacggttacgattgattcaaaaagtgcacagctgctatct
ggtccagcacttgtctcacggggatttgtttatatgaaagaatccgtcgagttattaagt
gaagctgaacggcttgttgaaaaggaagttaaagctctgttggacgagggtgtaacacag
tggacggacctcaagaaaaaaatatctgatcttctcacctcttacttttttgaacaaaca
aaacggaatccgatgatcctgcccattattatggaagtttaa
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