Alkalihalobacillus sp. AL-G: MOJ78_15220
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Entry
MOJ78_15220 CDS
T09526
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
alkg
Alkalihalobacillus sp. AL-G
Pathway
alkg03030
DNA replication
alkg03430
Mismatch repair
alkg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MOJ78_15220
03430 Mismatch repair
MOJ78_15220
03440 Homologous recombination
MOJ78_15220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alkg03032
]
MOJ78_15220
03400 DNA repair and recombination proteins [BR:
alkg03400
]
MOJ78_15220
Enzymes [BR:
alkg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MOJ78_15220
DNA replication proteins [BR:
alkg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MOJ78_15220
DNA repair and recombination proteins [BR:
alkg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MOJ78_15220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WLD92356
LinkDB
All DBs
Position
complement(2980927..2984310)
Genome browser
AA seq
1127 aa
AA seq
DB search
MSFVHLHIHSEYSLLESACRIDKLIDRAAQLGMDSLALTDRNVMYGILPFYQTCVSKGIK
PILGLEIDMDPSTDERGKEGTSRLLLYARNNDGYHNLVKISSLIGKNTSTTIGIQDLHNH
TDGLLAVSAGTGGVVQRFLSKHDNRGAEKAADRLSGLFNKGFYLGIEDHGLAKEKELNLS
LIQFSKNNDLPLVAMNDVLYINQEDAQAFDALQAIKHGKKLSELEKESSRTKEYFFKSTD
EMVRLFSHLPEAINTTKEIADKCNVHLSFGNLILPKFPIPDHGTSSDYIKKICHKAVKER
FGDQPSTEVKNRLAYELEIIDRMGFNDYFLIVWDFMKYARDKGILTGPGRGSAAGSLVSY
VLQITQVDPIEHDLLFERFLNPERVTMPDIDIDFPDTKRDEVIQYVASKYGKDHVAQIIT
FGTLAARAAIRDVGRVLNLSQSVIDRVAKYLPSRPGMTLEKALAESPALKRVLEQSDEAT
QLWLIAKTIEGLPRHASTHAAGIVISDDPLTDVVPVQEGNEHLALTQYTMDGLEDIGLLK
MDFLGLRNLSLLEDICTLIEKDHGEKLNLNTLPFNDENTYKHLSEGDTTGIFQLESDGMR
KVLMKLKPSEFEDIVAVNALYRPGPMENIPAYIEGKHGKRTVRYPHPDLKSILEKTYGVI
VYQEQIIQIASKMAGFSLGEADLLRRAVGKKKAEVLHKEREHFVQGATRNGYTTETADHV
YDLIVRFANYGFNRSHAVAYSVIAYQLAYLKSNYPLHFMAALLSSAIGNQNKTAAYLNEA
RQKGISILPPSINESQSGFKVENKGLRIGLLVIKNVGVRAIEALLEERRKKGAYRDLFDL
CKRVSLKVVNKRSLESLILAGCMDEFTKNRAQLLATLDDALEYAAKIQKSDEEGQFDLFP
NDEGHPKSVYETVPPFHDKEKLQFEFEALGFYLTGHPLESFKEVLIAYNRSLIGQIEGEQ
RGIRIGTLVTRVKTIKTKKGEWMSFVNISDETGEIECVVFPKTYRAYRDCFEEGKLLLLE
GNVETKDTQKLIVEKAVDLHTLSLPQQKEENSKANLFLRIDTTKHGEGVLHSIHKIVLQY
PGNTDVILYYEQSGKTLRLSKQYNIDTITDCIFKLESLLGSNNVVLK
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgtacatctacatatacatagtgaatacagtctgcttgaaagtgcctgcaga
atcgacaaattgattgatcgagcagcacaattagggatggattctttagcgttaacggat
cggaacgttatgtatggaatcctacccttttatcaaacgtgtgtatcgaaggggattaaa
ccgattcttgggcttgaaatcgatatggatccatctactgatgaacgtgggaaagaaggg
accagtcgcttattgctgtatgctaggaacaatgatgggtatcataatctggtgaaaatc
agctcactaattggaaagaatacatcgacaacaattggaattcaggatttgcacaatcat
acagatggattgctcgcggtgtctgcaggtacgggcggcgttgttcaacgttttttaagc
aagcatgataatagaggtgctgagaaagcagccgacaggctttcggggttatttaacaaa
ggcttttatttagggatagaagaccatggactagctaaagaaaaggagcttaatcttagt
ctcattcagttttcaaagaataatgacctgccacttgtcgcaatgaatgatgtcctttac
ataaatcaagaagatgcccaagcatttgatgcgttgcaagctattaaacacggtaagaag
ttaagtgaattagaaaaggaaagttctagaacaaaagagtatttttttaaaagcacagat
gaaatggtgaggctcttttcacatcttcctgaagcgataaacaccacaaaagaaattgct
gacaagtgcaatgtccacttgtcgtttgggaacctgattttgccgaaattcccgattcct
gatcatggtacaagctccgactatataaaaaaaatatgccacaaagcggtaaaagagcgg
ttcggagaccagccatcgactgaggtgaagaaccggcttgcatacgaacttgaaatcatt
gatcgtatgggtttcaatgattatttcttgattgtatgggactttatgaagtatgcaaga
gacaagggaattttgacaggacctggacggggatctgcagcaggttccctcgtctcatat
gtactgcaaattacacaggttgatccgattgaacatgaccttctttttgagcgattttta
aatcctgaacgagtaacgatgcctgatattgatatcgactttccagatacaaagagagat
gaagtcattcaatacgttgcttcgaaatatggaaaggatcatgtcgcccaaatcattaca
ttcggcacgctagctgcaagagctgcaatacgagatgtcggacgggtcttaaacctgagt
caaagcgtgattgaccgagttgcaaagtatctaccttcaagacctggtatgactcttgaa
aaggctttggcggagtccccagcattaaaacgggttcttgaacaatctgacgaagcgact
cagctgtggttgattgcaaaaaccattgaaggcttacctcgtcatgcttctacccacgcg
gccggtattgtaatcagcgatgatccgttgaccgatgtcgttccagtacaagaaggaaat
gaacatttagcattgactcaatacacgatggatgggctagaggacatcgggctgttaaaa
atggactttcttggtcttcggaatctatcattgttagaagatatttgcacattgatcgaa
aaggatcatggggaaaagcttaacctgaatacacttccatttaacgatgaaaatacgtat
aagcatttaagtgaaggggatacgacagggattttccagctcgagtcggatggaatgcga
aaggtgcttatgaaattgaaaccgtctgaatttgaagacatcgtggcggtaaacgcattg
tacagaccaggcccaatggaaaatatccctgcttatattgaagggaaacatggaaaacgt
acggttcgctatccacacccagacctcaaatcgattttagaaaaaacgtacggtgtgatt
gtttatcaggaacagatcatccaaattgcgtctaaaatggcagggttttctctcggtgag
gcagatttactacggagagcagtcggtaagaaaaaggcagaggtcttgcacaaggagaga
gagcactttgtccaaggagcgactaggaatggatacacgactgagactgccgatcatgtc
tatgacctaatcgtacggtttgctaattatggtttcaaccgctcgcatgcggtggcgtat
agcgtcattgcttaccaactagcctacctaaagtccaattatccgttacacttcatggct
gcgctgcttagcagtgccattgggaatcaaaataagacagcagcctatttgaatgaggcc
cggcagaaaggaatatccatacttccgccgtcaatcaacgaaagtcaatcaggatttaaa
gtggaaaataaggggcttcgtatcggcttacttgtaatcaagaatgtaggagttcgagcg
attgaagcattacttgaggagagaaggaagaagggggcataccgcgatctatttgatttg
tgcaagcgtgtatcgttgaaagtagtaaataagcgcagcctcgagtctcttattcttgct
gggtgcatggatgaattcacgaaaaaccgtgcacagttgctcgcaactctcgacgatgcg
cttgaatatgctgctaaaatccaaaagtctgatgaagaaggtcaattcgatcttttccct
aatgatgagggccatcccaagtcagtctatgagacagtccctcccttccatgataaagaa
aagcttcaatttgaatttgaagcacttggtttttatttaacaggacatccactagaatca
ttcaaggaagtgttaattgcgtataatcgcagtctgattggccagattgaaggtgaacag
cgcggaataaggatagggacactcgtaacaagagtcaagacaatcaaaacaaaaaaaggc
gaatggatgtcttttgtaaatattagtgacgaaactggcgaaatcgaatgtgttgttttt
ccaaaaacctaccgtgcatatcgagattgctttgaagaggggaagctcctgttacttgaa
gggaatgttgaaacaaaagatacccaaaaactgatcgtcgaaaaagctgtcgatctccat
acgttatcgcttccgcaacaaaaggaagagaacagcaaggcgaacttatttttaagaata
gatacgacgaaacatggtgaaggtgttctacacagcatccacaaaattgttctacagtat
ccaggaaacaccgacgtcatattatattatgaacaaagtgggaagacgctcagattatcg
aaacagtataatattgacaccatcactgattgtattttcaagttagaatcattgcttgga
tcgaataatgttgttttaaaatga
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