Alkalihalobacillus sp. AL-G: MOJ78_15590
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Entry
MOJ78_15590 CDS
T09526
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
alkg
Alkalihalobacillus sp. AL-G
Brite
KEGG Orthology (KO) [BR:
alkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alkg03016
]
MOJ78_15590 (thpR)
Enzymes [BR:
alkg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
MOJ78_15590 (thpR)
Transfer RNA biogenesis [BR:
alkg03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
MOJ78_15590 (thpR)
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Paralog
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WLD92427
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All DBs
Position
complement(3058780..3059352)
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AA seq
190 aa
AA seq
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MGRHTFLAVPLPERIQQQIAAFSTQAKSVLPLKKWTGTRDYHITLSFLGDSSENQLNGLK
AELEKKMLFHNPFHLVLNDIGVFGNPLTPSVFWLGVNPSEPLSSLQGDVEAACSTAGFRI
ENRSYRPHITIGKRWNGAAGQSVSLKELPTPDYLESLDWKVDEIILYEIHPQQQPMYVPW
HRFRLDQEEH
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgggacgacatacatttttggcagtaccattaccagaacggatccaacagcaaatcgcc
gcattctctacacaagcaaaatcggttcttcccctgaaaaagtggacggggacaagggac
taccatattacactttctttcctaggcgattcatcagaaaatcaattgaatggactgaaa
gctgaactcgagaaaaagatgctgtttcataacccttttcatctagtgctgaatgatata
ggtgttttcggaaatccgttgaccccgagtgttttttggcttggtgtaaatccatctgag
ccgctttcatcgcttcaaggggatgtagaggcagcgtgcagtactgcaggctttcgtatt
gaaaacagatcgtatcgaccacatattacaatcgggaaacggtggaatggggcagcagga
caatctgtatcgctaaaagaattaccaactcctgattaccttgaatcactcgactggaag
gtggatgaaataatcctttatgagattcatccacagcagcaaccgatgtacgttccatgg
caccgattcagactagatcaggaagaacactaa
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