KEGG   Alkalihalobacillus sp. AL-G: MOJ78_18105
Entry
MOJ78_18105       CDS       T09526                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
alkg  Alkalihalobacillus sp. AL-G
Pathway
alkg02020  Two-component system
alkg02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:alkg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MOJ78_18105 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    MOJ78_18105 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:alkg03021]
    MOJ78_18105 (rpoN)
Transcription machinery [BR:alkg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MOJ78_18105 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_17 Arg_repressor DUF6471 HTH_3 HTH_23 Sigma70_r4 HTH_IclR HTH_Crp_2 HTH_12 HTH_20 LacI HTH_Tnp_ISL3 Fe_dep_repress
Other DBs
NCBI-ProteinID: WLD92894
LinkDB
Position
complement(3545545..3546882)
AA seq 445 aa
MELGLFQTQSMKLVMTQELRQAITILQYPVLELSQFIEQQAVENPLVELRESVIEPKGTE
ALSSARTDQSTWDYDADNDVNPINFIKSDDDSLQSYLLEQLSFLKLSSEERSLTEYMIFC
LNEDGFLDCSLECLKDELDISETEAVTALERIQTFEPVGVGARSLSECLLLQYEAKGFDL
PIARTIITDHLEELADKKWLQLTKQLNVSMEELKQAEQLIRSLNPRPCAEFSRGTSEWVQ
PEFFIERDVRGRLLIRLNEDFVPEIILNERYFRMLEHNKEARPYLEKQLQKYHWLKNSLD
QRRQTLRRMGEYLLRAQRDFFDHGFEALRPMTLKEVAESIDVHESTVSRAVKNKMLQTPK
GAIPLKSLFTSRIDKGHQNEDMSSTQVKIRIKRLIEREEKRKPLSDQKLADALKEEGIEI
SRRTVAKYREELRIPPSSKRKSLLV
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggagttaggtctttttcaaactcaatcgatgaagcttgtgatgacacaagaattacga
caggccataacgattttacagtacccggtgttagaattatcacaatttattgaacaacaa
gcggtcgaaaatccattggttgaattgagggaatcggtcattgagcccaaggggacagag
gcattgtcttcagcacggacggatcaaagcacttgggattatgatgctgacaatgatgtg
aatccgatcaactttataaaatcggacgatgattcgttgcaatcttaccttttggagcag
ctttcgtttttaaaactgagcagtgaagagaggtcgcttactgaatatatgattttttgc
ttgaacgaagacggtttcctagactgctcgttagagtgtttaaaggatgagctggacatt
tcggaaacagaggcagttacagctttagagcggatccagacgtttgagccggtgggggtt
ggagctcgctctctttcagaatgtctattgcttcaatatgaggccaagggatttgattta
ccaatagcacgcacgattattaccgatcatttggaggaattggcggataagaaatggctg
cagcttacgaaacagctgaatgtatcgatggaggaactgaagcaagctgaacagttgatc
cgttcgttaaatccgaggccatgtgcggaattttcaaggggaacatctgagtgggtacag
ccggagttttttattgaaagggatgtacgaggtcgtttgttgattcggttgaatgaggat
tttgtaccggaaatcatacttaatgaacggtattttcgaatgcttgaacataataaagag
gcacgtccgtatcttgaaaaacagctgcaaaagtatcactggctgaaaaacagtttggat
cagcgccgacaaacgctgagaaggatgggcgagtatttgcttcgggctcagcgagacttt
tttgatcatggattcgaagctttacgtccgatgactttgaaggaagtggctgaatcgatt
gacgttcatgaatcaactgtcagtcgtgcggttaaaaacaagatgctccaaactccaaag
ggtgcaattccattaaagtcattgtttacgtctcgaatcgataaagggcatcagaatgag
gatatgtcttcgacccaagtgaagatccggatcaagcgattgattgagcgggaggaaaaa
cggaagccgctctcagatcaaaagcttgctgatgcgttgaaagaggaagggatcgaaatt
tcgagacgaacggttgcgaagtaccgtgaagagctacggattcctccgtcctcaaaacga
aaaagtcttttagtttag

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