Alkalihalobacillus sp. AL-G: MOJ78_18105
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Entry
MOJ78_18105 CDS
T09526
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
alkg
Alkalihalobacillus sp. AL-G
Pathway
alkg02020
Two-component system
alkg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
alkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MOJ78_18105 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MOJ78_18105 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alkg03021
]
MOJ78_18105 (rpoN)
Transcription machinery [BR:
alkg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MOJ78_18105 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_17
Arg_repressor
DUF6471
HTH_3
HTH_23
Sigma70_r4
HTH_IclR
HTH_Crp_2
HTH_12
HTH_20
LacI
HTH_Tnp_ISL3
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
WLD92894
LinkDB
All DBs
Position
complement(3545545..3546882)
Genome browser
AA seq
445 aa
AA seq
DB search
MELGLFQTQSMKLVMTQELRQAITILQYPVLELSQFIEQQAVENPLVELRESVIEPKGTE
ALSSARTDQSTWDYDADNDVNPINFIKSDDDSLQSYLLEQLSFLKLSSEERSLTEYMIFC
LNEDGFLDCSLECLKDELDISETEAVTALERIQTFEPVGVGARSLSECLLLQYEAKGFDL
PIARTIITDHLEELADKKWLQLTKQLNVSMEELKQAEQLIRSLNPRPCAEFSRGTSEWVQ
PEFFIERDVRGRLLIRLNEDFVPEIILNERYFRMLEHNKEARPYLEKQLQKYHWLKNSLD
QRRQTLRRMGEYLLRAQRDFFDHGFEALRPMTLKEVAESIDVHESTVSRAVKNKMLQTPK
GAIPLKSLFTSRIDKGHQNEDMSSTQVKIRIKRLIEREEKRKPLSDQKLADALKEEGIEI
SRRTVAKYREELRIPPSSKRKSLLV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggagttaggtctttttcaaactcaatcgatgaagcttgtgatgacacaagaattacga
caggccataacgattttacagtacccggtgttagaattatcacaatttattgaacaacaa
gcggtcgaaaatccattggttgaattgagggaatcggtcattgagcccaaggggacagag
gcattgtcttcagcacggacggatcaaagcacttgggattatgatgctgacaatgatgtg
aatccgatcaactttataaaatcggacgatgattcgttgcaatcttaccttttggagcag
ctttcgtttttaaaactgagcagtgaagagaggtcgcttactgaatatatgattttttgc
ttgaacgaagacggtttcctagactgctcgttagagtgtttaaaggatgagctggacatt
tcggaaacagaggcagttacagctttagagcggatccagacgtttgagccggtgggggtt
ggagctcgctctctttcagaatgtctattgcttcaatatgaggccaagggatttgattta
ccaatagcacgcacgattattaccgatcatttggaggaattggcggataagaaatggctg
cagcttacgaaacagctgaatgtatcgatggaggaactgaagcaagctgaacagttgatc
cgttcgttaaatccgaggccatgtgcggaattttcaaggggaacatctgagtgggtacag
ccggagttttttattgaaagggatgtacgaggtcgtttgttgattcggttgaatgaggat
tttgtaccggaaatcatacttaatgaacggtattttcgaatgcttgaacataataaagag
gcacgtccgtatcttgaaaaacagctgcaaaagtatcactggctgaaaaacagtttggat
cagcgccgacaaacgctgagaaggatgggcgagtatttgcttcgggctcagcgagacttt
tttgatcatggattcgaagctttacgtccgatgactttgaaggaagtggctgaatcgatt
gacgttcatgaatcaactgtcagtcgtgcggttaaaaacaagatgctccaaactccaaag
ggtgcaattccattaaagtcattgtttacgtctcgaatcgataaagggcatcagaatgag
gatatgtcttcgacccaagtgaagatccggatcaagcgattgattgagcgggaggaaaaa
cggaagccgctctcagatcaaaagcttgctgatgcgttgaaagaggaagggatcgaaatt
tcgagacgaacggttgcgaagtaccgtgaagagctacggattcctccgtcctcaaaacga
aaaagtcttttagtttag
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