Alkalihalobacillus sp. LMS39: MM271_00560
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Entry
MM271_00560 CDS
T09200
Symbol
clpC
Name
(GenBank) ATP-dependent protease ATP-binding subunit ClpC
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
alkl
Alkalihalobacillus sp. LMS39
Brite
KEGG Orthology (KO) [BR:
alkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
alkl03110
]
MM271_00560 (clpC)
Chaperones and folding catalysts [BR:
alkl03110
]
Heat shock proteins
HSP100
MM271_00560 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_16
AAA_22
nSTAND3
RuvB_N
IstB_IS21
TniB
UVR
AAA_18
Mg_chelatase
AAA_14
ATPase_2
AAA_7
Zeta_toxin
AAA_3
NACHT
bpMoxR
ResIII
Torsin
AAA_25
NBD_SMAX1
Flg_hook
DUF6933
Sigma54_activ_2
HGD-D
Motif
Other DBs
NCBI-ProteinID:
UOE94223
LinkDB
All DBs
Position
108017..110455
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AA seq
812 aa
AA seq
DB search
MMFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALQALGLGSDKI
QTEVESLIGTGQEGSKTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVA
ARVLNNLGVSLNKARQQVLQLLGSNEATGASQQGQPSNANTPTLDSLARDLTSIAKEEGL
DPVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIINNEVPETLRNKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNI
LKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVNEPTLDESIQILKGLRDRYE
AHHRVKITDEAIEESVKLSDRYIADRFLPDKAIDLIDEAASKVRLRSYTAPPNLKELEQK
LEETRKEKDAAVQSQEFEKAASLRDSEQRLREELDGMKNEWKKKQGQENTEVAVDDIAQV
VASWTGIPVSKLAEEETERLLRMEEILHQRVIGQEEAVKSISKAVRRARAGLKDPKRPIG
SFIFLGPTGVGKTELARAVAETLFGDEDAFIRIDMSEYMEKHATSRLVGSPPGYVGHDEG
GQLTEKVRRNPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTAIIMTSN
VGASTLRKNKFLGFAVEGENHEYKDMKGKVMSELKNSFRPEFLNRIDEIIVFHSLEKKHV
RQIISLMAEQLKKRLAEQGIEFELTEAAMDKITNEGYDPEYGARPLRRALQKQVEDRLSE
ELLKGTIQKGQRAIIDLKDDELTVETKANAQV
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttggaaggtttacagaacgcgcacaaaaagtattagcactagcacaagaagaa
gcaatacgattagggcacaataatataggaacagaacatatattgctaggattaattcgt
gaaggggaaggaattgcggcgaaagctttacaagcacttggcctaggctcagacaaaatt
caaacagaagtcgaatcactcattggtacgggtcaagaaggttcaaaaacaatccactat
actccaagagcgaaaaaagtaatagagctatccatggatgaagcgagaaagcttggacat
tcatacgttggtacagagcatattttattaggtttaattcgtgaaggggaaggcgttgct
gcccgtgtgttaaataatttaggggtaagtctaaacaaagcacgtcaacaagtacttcag
cttctaggtagtaatgaagcaacaggcgctagtcaacaagggcagccatcaaatgcgaat
acaccgactttagatagtttagcccgtgatttaacatcgattgcaaaagaagaggggtta
gatccagtcattggacgaagtaaggaaattgagcgtgtaattcaagttttaagccgcaga
acgaaaaataacccggttttaattggagaaccaggtgtcggtaaaacagcgattgctgaa
gggttagctcaagctatcatcaataatgaagttccagaaacattacgaaacaaacgagtc
atgactctagatatgggtacggttgtagctggaacaaaatatcgtggggagtttgaagac
cgtcttaaaaaagtgatggatgaaatcagacaggcgggaaatgttattttatttattgat
gaattgcatacgctcattggtgctggaggagcagaaggcgctatcgatgcttcaaacata
ctaaaaccatcgcttgctcgtggtgagttgcaatgtattggggcaacgacattagatgaa
tacagaaaatatatcgaaaaggatgccgcattagagcgaagatttcagcctattcaagtt
aacgaaccaacgttagatgaatcgattcaaattttaaaaggattacgtgaccgttatgag
gcccaccaccgtgtaaaaattacagacgaggcgattgaagaatctgttaaactgtctgat
cgctatatcgcagaccgctttttaccagataaagcaattgatttaattgatgaggcagca
tcaaaagtccggttacgttcttacactgcaccaccaaatttaaaagagttagagcaaaaa
ctagaagaaacacgaaaagaaaaagatgctgctgtacaaagtcaagagttcgaaaaagca
gcttcacttcgagacagtgagcagcggttacgcgaagagcttgatggtatgaaaaatgag
tggaagaaaaaacaaggacaagaaaatacggaagtcgctgtcgatgatattgcccaagtc
gtggcgagctggacaggaattcctgtttcaaaactggcagaagaggaaacagaaagactt
cttcgtatggaagagattttacaccaacgagtcattgggcaagaagaagctgtcaagtcg
atttctaaggccgttcgtcgtgcacgcgcaggtttgaaagacccgaaacgaccaattggt
tcatttatcttcctaggacctacaggggtcggtaaaactgaattagctcgggctgttgct
gaaacgctttttggagacgaagatgcattcattcgaattgacatgtcagaatatatggaa
aagcatgcaacaagtcgattagttggatcacctcctggttatgtcggtcatgatgaaggt
ggtcagttaacggaaaaggttagacgtaatccatattctgttatccttttagatgaaatt
gaaaaagcacatccagaagtattcaatattctattacaagtgttagaggatggtcgctta
acagattcaaaaggccgtacagttgattttcgaaatacagccattatcatgacttcgaat
gtaggagctagtacgttacgcaaaaataagttccttggatttgctgttgaaggagaaaac
catgagtacaaagatatgaaaggcaaagtaatgtctgagctaaaaaattcgtttagacct
gaatttttaaaccggattgatgaaatcattgtattccattcattagagaagaaacatgtt
cgtcaaattatctcattaatggcagaacagttaaagaaacgcttagctgaacaaggaatt
gaatttgagttaacagaagcggcaatggataaaattacaaacgagggttatgaccctgag
tatggtgcaagaccgttacgaagagcattgcaaaaacaagtagaagatcgtttatctgaa
gaattgttaaaaggtacaattcaaaaaggacaaagagcaattattgacctgaaggatgac
gaactaacagtagaaacaaaggcaaatgcacaagtataa
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