Alkalihalobacillus sp. LMS39: MM271_01380
Help
Entry
MM271_01380 CDS
T09200
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
alkl
Alkalihalobacillus sp. LMS39
Brite
KEGG Orthology (KO) [BR:
alkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alkl03021
]
MM271_01380 (sigB)
Transcription machinery [BR:
alkl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MM271_01380 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_3
GerE
Sigma70_ECF
DUF134
PhyR_sigma-like
TnsD
HTH_37
HTH_50
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
UOE94368
LinkDB
All DBs
Position
249803..250588
Genome browser
AA seq
261 aa
AA seq
DB search
MSMKPQQQNKSSEDIEKWIREFQKNQNEEIQTKLVTHYDPLVQTLSKKFAKGREHEEDLY
QVGMVGLLGALRRFDLEYGKSFESFAVPTIIGEIKRFIRDKTWSVHVPRRIKELGPKIKK
AVEALTTELQRSPKVEEIADYLDVSMEEVLEAMEMGKSYQALSVDRSLEADQEGGEVTLL
DLVGQQDQGFDRTDQQMVIEKAFDVLNERERQILLYTYYENLSQKETGEKLGISQMHVSR
LQRKALEKLRKSIRVEPSECL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaaacctcagcaacaaaacaagagcagtgaagacatcgaaaagtggataaga
gagtttcaaaaaaatcaaaatgaagaaattcaaacaaaattagtaacgcattatgatccg
ctcgttcaaactctttcaaaaaagttcgctaaaggtagggaacatgaggaggacttatat
caagtcggtatggtcggtcttcttggcgccctcaggcgatttgatttagaatacggaaag
tcgtttgaatcctttgccgtaccaacgattattggagaaattaaaaggtttattcgtgat
aaaacatggagtgttcatgtgccgcgaagaatcaaagagttagggccgaaaattaaaaaa
gcggttgaagcattaacaacggagctgcaacgttcaccaaaggtggaggaaattgcagac
tatcttgatgtctcaatggaagaagtattggaagcaatggagatggggaaaagctaccaa
gctttatctgttgaccgatcgttggaagctgatcaggaaggtggagaagtaactcttcta
gatttagttggacaacaagaccaagggtttgaccgaacggatcaacaaatggtaatagaa
aaagcgtttgatgtgctaaatgaacgagagcgacaaattttattgtatacgtattatgaa
aatttaagtcaaaaagaaaccggtgaaaaattaggaatatcacaaatgcatgtatcccgc
ttgcagcgaaaagcattagagaagttacgaaagtcaattcgtgtagagccatcggagtgt
ctataa
DBGET
integrated database retrieval system
