Alkalihalobacillus sp. LMS39: MM271_02150
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Entry
MM271_02150 CDS
T09200
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
alkl
Alkalihalobacillus sp. LMS39
Pathway
alkl03420
Nucleotide excision repair
alkl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alkl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MM271_02150 (pcrA)
03430 Mismatch repair
MM271_02150 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alkl03400
]
MM271_02150 (pcrA)
Enzymes [BR:
alkl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MM271_02150 (pcrA)
DNA repair and recombination proteins [BR:
alkl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MM271_02150 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MM271_02150 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
DUF4528
Motif
Other DBs
NCBI-ProteinID:
UOE94494
LinkDB
All DBs
Position
414698..416926
Genome browser
AA seq
742 aa
AA seq
DB search
MQSKIIEKMLAGLNPEQREAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLREKGVAPWNV
LAITFTNKAAREMKDRVAKLVGPIAEDIWISTFHSMCVRILRRDSNRIGINSNFTILDGS
DQLSVIKQILKTKNIDPKKFDPRSLLATISSAKNELKRAEDFMKSTSNQDLFRSTAAEVY
VEYEKQLKKNQSLDFDDLIMTTIRLFKLVPEVLEYYQNKFQYIHVDEYQDTNKAQYELVN
LLSEKFKNICVVGDSDQSIYRWRGADIANILSFEEDYPNATVIMLEQNYRSTKTILQAAN
EVIGNNSNRKPKNLWTENEEGQKIFYYEADTEQDESFFVTDKIKEATRLGTYKNADIAIL
YRTNAQSRVIEEMLLKSNIEYNIVGGTKFYDRKEIKDILAYLRLVANPDDDISLQRIINV
PKRGIGAATVDKIGAFAVDQDISMFQALQEVEELGLGARVVSKLREFVNQMNNWISMQDY
LSVTELVEELLDRTGYREMLKVENTLESQSRLENIDEFLSVTQDFEKKNDDKSLVAFLTD
LALVADIDKLDENEEKPADAVVLMTLHSAKGLEFPIVFLIGMEEGIFPHSRSLFENDEME
EERRLAYVGITRAEQTLYLTSARLRTLYGRTNTNPPSRFINEIPSELLESMQEEKPEPLW
MKSSRPQAAPMTKKQIPRPQIQTTGGEQFGWSVGDKAEHKKWGVGTIVSIKGEGEHIELD
IAFPQPTGIKRLFAKFAPITKV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtaaaatcattgaaaaaatgctagcaggattaaatccagagcaacgagaagct
gtgaaaacaacagaaggtccccttttgattatggccggagcaggtagtggaaagacaaga
gtgttaactcatcgtattgcctatttattacgagaaaaaggagtcgccccttggaacgta
ttggcgattacatttacaaataaagcggcacgtgagatgaaggaccgtgtcgctaaactt
gttggtccaatagcggaagacatttggatttcaactttccattccatgtgtgtccgaatt
ttaagaagagatagtaatcgaatcggaataaatagtaattttacgattttagatgggtct
gaccagctttcggttataaagcaaatcttaaaaacaaagaacatcgacccgaagaaattt
gacccgagaagcttgttagcaacgataagctcggcgaaaaacgaattgaaacgagccgaa
gacttcatgaagtcgacgagcaatcaagatttattccgttctacagcggcagaagtatat
gttgaatatgaaaagcagttaaagaaaaaccagtccttagactttgatgatttaattatg
acaacgattcgattatttaagctcgttccagaagtgcttgagtattatcaaaataaattt
caatatattcatgtggatgagtatcaagatacaaataaagcacaatatgagttagttaat
ttattaagtgaaaaatttaaaaacatttgtgtcgttggggattctgatcaatctatttac
cgatggcgtggagctgatattgctaatatcctatcttttgaagaagattaccccaatgcc
actgtcattatgcttgagcaaaactaccgttcaacgaaaaccattttacaagcggcaaat
gaggttatcggcaataatagtaatcgtaaaccgaaaaatttatggacagaaaatgaagaa
ggccagaaaatcttctattacgaggcagatacagaacaagatgagtctttctttgtgact
gataagataaaagaagcaacaagactaggaacgtataaaaacgctgatattgcaatttta
taccgaacaaatgcgcaatcccgtgtgattgaggaaatgcttcttaaatcaaatattgaa
tataatatcgttggcggcacaaagttctatgaccgaaaagaaattaaagacattcttgct
tatttacgtcttgtggccaatcctgatgacgatattagtttacaacgaattattaatgtt
ccgaaacgggggattggtgcagcgaccgttgataaaattggagcatttgcggttgaccaa
gacatctcgatgtttcaagcgcttcaagaagttgaagagcttggcttaggtgcaagagtt
gtgtccaaactacgagaatttgtgaatcaaatgaataactggatttctatgcaagattat
ttatcggtaaccgagctagttgaagagttactagaccggacaggctatcgtgaaatgtta
aaagtagaaaatacgctggagtcgcaaagtcgtcttgaaaacattgatgagtttttatca
gttacacaagacttcgaaaagaaaaatgatgataaatcactagtcgcatttcttactgat
ttggctcttgttgcagatattgataaactagatgaaaatgaagaaaaaccagcagatgcc
gttgtgcttatgacattacattctgcaaaagggttagagtttccgattgtctttctaatt
ggaatggaagaagggattttccctcacagccgttcgttatttgaaaatgatgaaatggaa
gaagaacgcagacttgcgtatgttggaattacacgagccgaacaaacactatatttaaca
agtgctagacttagaactttatacggacggacaaatacaaatccgccatcaagatttatt
aacgaaattccaagtgagttactcgaatcaatgcaagaagaaaagccagaaccgctttgg
atgaaatcttctcgaccgcaagcggcaccaatgacaaaaaaacaaattccacgtccacaa
attcagacgacaggtggagaacagttcggctggagtgttggtgataaagcagaacataaa
aagtggggagttggcacaatcgttagcataaaaggggaaggagagcatatagaattagat
attgcattcccacaacctactggtattaaacggctttttgctaaatttgccccaattaca
aaggtgtaa
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