Alkalihalobacillus sp. LMS39: MM271_02750
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Entry
MM271_02750 CDS
T09200
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
alkl
Alkalihalobacillus sp. LMS39
Brite
KEGG Orthology (KO) [BR:
alkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alkl03400
]
MM271_02750 (addB)
Enzymes [BR:
alkl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MM271_02750 (addB)
DNA repair and recombination proteins [BR:
alkl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MM271_02750 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
UOE94603
LinkDB
All DBs
Position
557209..560715
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AA seq
1168 aa
AA seq
DB search
MSLQFLIGRSGTGKTTHCLEEIKTKLISDPLGSPVIYLVPDQMTFQSEYKLVQSPDINGM
LRAQVFSFTRLAWRVLQETGGLSRYHIEQTGVHMMLRKIVEHEKDQFKVFGKAAETNGFI
KQLEEMVAEWKRYAITPDMLLMNRERILSQGELKPYEKVLADKLYDFYIITKQFEEQLEG
KYVDSEDYLTLLTEKIPFSSYIEESEIYIDGFHSFTPQELYVLGALMKKAKKVTIALTID
KVYEHDMPHELDLFHMTAKTYKQLIYIAEQNNCELEKPILFSESFRYKSPAIAHLEQHFD
ARPAVLFSGESDVSVLTAVHRRAEVEGVARTILKLVREDHYRFRDIALLIRNSEEYHHLI
ETIFKDYEIPVFLDQKKSMLNHPVVEFMRSILDIFQGNWRYEAVFRCLKTDLLLNGPIDN
QVRETIDVLENYVLAYGIQGHRWYDDNRWKYRRFQAIDENEAVKTDDEEKMESRLNELRQ
VIVQPVRKLEKKLMKKNTVQEKCEAFYLFLEEVNLPAKLEQLREKAVEEGQVEAAREHDQ
VWNTVVGLFDQIVEMIGEETISFDLFKTMLDTGFESMTFAIVPPAIDQVLVASMERSRFS
DIQTTFILGVNDGVIPAKPKEEGVLSEQERDWFDKLGMPLAPGSRQQLLDEAFLIYLAMT
SPAKKLYLSYPLADEEGKTLLPSNVIKRMEDVIPSVTKEFIINEPNEVAEEHQLDFVSNP
TKTLSFLSYQLQAWKKGYPISTVWWDVYNWYVEHEQTSRAKAVLSSLFYKNEAKKLAAST
SRALYGDHIKTSVSRMEKYESCAFSQFASHGLKLRERELFRLEAPDVGTLFHAALKMVAD
HLRQEGIHWGQLSKEQCEQLAKMMVGRLAPKIQREILLSTNRYQYITRKLEQVVGRASII
LRDHAKVSGFSPVGLEVGFGPREPLPPIRFTLPNGCTMELIGRIDRVDRADVESGTLLRI
IDYKSSQKALRLDEVYYGLTLQMLVYLDVVLTFAKQWIGTEALPAGVLYFHVHNPLIQSS
SAMSIEKIEEEIFKSFKMKGLLLANETSIREMDHTLEAGHSDIIPVGLKKDGSFYSNSSV
VSTEQFDEVRQYLRKKMVHIGERLTEGVIDINPYKLKKQTPCTFCEYRSLCQFDTVETND
FRVLIPQKQDEILEMMRTEGSDHSENSG
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcaatttcttattggtcgttcaggaacagggaagacaacgcattgcttagaa
gaaattaaaacaaagctgatttcagacccattaggttctcctgtcatatatcttgttcct
gaccaaatgacattccagtctgaatataaattggtccagtcaccagatattaatgggatg
cttcgcgcgcaagtatttagctttactcgtttagcatggcgtgtgcttcaagaaacaggt
ggattgtctcgttatcatattgaacaaacgggtgttcatatgatgcttagaaaaattgtg
gaacatgaaaaggaccaattcaaagtattcggtaaagctgcagaaacgaacggttttatt
aagcaacttgaagaaatggtagcagaatggaaacgatatgcgattacacctgacatgtta
ttaatgaatcgagaaaggattcttagtcaaggagaacttaaaccatatgaaaaagtgtta
gcagataaattatatgatttttacatcattactaaacagtttgaggagcagctagaagga
aaatatgttgattccgaagattatttaacgctattaacagagaaaatacctttttcttct
tatattgaagaaagtgaaatttatatagatggttttcatagttttactcctcaagagctt
tatgttcttggtgcgttaatgaagaaagcaaagaaagtaactatcgctttgacgattgac
aaagtatatgagcatgacatgccacatgaattagatttgtttcatatgactgcaaaaaca
tataaacaattaatatatattgcagagcaaaacaattgtgaactagaaaagccgattctt
ttttctgaatcgtttcgctataaaagcccagctattgctcacctagaacagcattttgat
gcaagaccagctgttctgttttccggtgaaagtgatgtttcggtactaacagctgttcat
cgcagagcagaagtagaaggagtcgcacgtaccattctcaagctagtgcgagaggaccac
tatcgttttcgcgatatcgctttactcattcgtaatagtgaggagtatcatcatttaatt
gaaacgattttcaaagattatgagattcccgtgttcctagaccaaaaaaaatcgatgtta
aaccatccggtcgtagagtttatgcggtccatccttgacattttccaagggaattggcga
tatgaggctgtctttcgttgtttgaaaacggacttattattaaatggtccaattgataac
caagttagggaaacgatcgatgtacttgaaaactatgtattggcatacggtatccaaggt
catcgatggtatgatgataaccgctggaaatatagacgctttcaagctattgatgagaat
gaagcagtaaaaaccgatgacgaagagaaaatggagtcaaggttaaatgagttaagacaa
gtcatcgtacagccagtgagaaagctagaaaagaaattgatgaaaaaaaatacggtgcaa
gaaaaatgtgaagcgttctacttatttttagaagaagtgaaccttcccgcaaaacttgaa
caactacgtgaaaaagcggtagaagaaggacaagtagaggctgctcgtgagcatgatcaa
gtgtggaatactgttgttgggttatttgatcaaattgttgaaatgatcggagaagaaacg
atttcttttgatttattcaaaacgatgttagatacaggttttgaaagtatgacgtttgct
atcgtgccaccagcgattgaccaagtactcgttgctagtatggaacggtcccgtttttca
gatatacaaacgacgtttatattaggagtaaacgatggtgtgattcctgctaagccgaag
gaagaaggcgtgttatcagaacaagaacgagactggtttgacaaattaggaatgccatta
gcacctggcagtcggcaacaattacttgatgaagctttcttgatttatttagccatgaca
agcccagccaagaagttgtatttatcttatccacttgcagatgaagaaggaaaaactcta
cttccttcaaatgtcattaaacgaatggaagatgtcataccttctgtcacgaaagagttt
attattaatgaaccaaatgaagtcgcagaagagcaccaacttgatttcgtttccaacccg
acaaaaactctgtcgtttttgtcttaccaacttcaagcttggaaaaaaggatacccgatt
tcgactgtttggtgggatgtctataactggtatgttgaacatgaacagacatcgagggca
aaagctgtgttatcaagcttattttataaaaatgaagcgaagaaactggcagcaagtaca
agtcgtgcgctttacggtgatcatattaaaacaagtgtatctcgtatggagaaatatgaa
agctgtgctttttcacagtttgcatcacatggtcttaagttaagagaaagggaactattc
cgcctagaagctcctgacgtaggaacgctttttcatgcagcattaaaaatggtagcagac
catctaagacaagaagggatacattggggacaattatcaaaagagcaatgcgaacaattg
gcgaaaatgatggtcggacgattagctccaaaaattcaacgggaaattctcttaagtaca
aatcgttatcaatatattacgagaaaattagagcaggtcgttggacgggcatcgataatt
cttcgtgaccatgcaaaggtgagtggattttctccagttggattggaagtagggtttgga
ccgagagaacctttaccaccgattcgatttacattgccgaatggctgtacgatggaatta
atcggacgaatcgatcgtgttgaccgagccgatgttgaatcaggtacattacttcgaatt
attgattataaatcaagtcaaaaggcgttacgacttgatgaagtgtattatggattaacg
ttacaaatgttagtttatttagatgttgtgctgacgtttgcgaagcagtggatcggaaca
gaggcattaccagcgggcgtgttgtatttccatgtacacaatcccttgattcagtcttct
agtgccatgtcaattgagaaaattgaagaagagattttcaagtcttttaaaatgaaaggt
ttacttttagcgaacgaaacatcgataagagaaatggaccatacgcttgaggcagggcac
tctgatattatccctgtaggattaaaaaaggatggaagcttttatagcaattcatctgtt
gtatctacagaacaatttgatgaagtaagacagtatttacgaaagaaaatggttcatatt
ggtgaacgtctaacagaaggtgtcattgatatcaacccttataaactaaaaaaacaaaca
ccatgtacgttttgcgaatatcgttctctttgtcagtttgatacggttgaaacaaatgat
tttcgtgtattaattcctcaaaaacaagacgagatactagaaatgatgcgcactgaagga
agtgatcatagtgaaaatagcggataa
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