Alkalihalobacillus sp. LMS39: MM271_02765
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Entry
MM271_02765 CDS
T09200
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
alkl
Alkalihalobacillus sp. LMS39
Brite
KEGG Orthology (KO) [BR:
alkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alkl03400
]
MM271_02765
DNA repair and recombination proteins [BR:
alkl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MM271_02765
Archaeal homologous recombinant proteins
MM271_02765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
DUF7803
ABC_tran
AAA_21
DUF7517
CagS
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
UOE94606
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All DBs
Position
565592..568993
Genome browser
AA seq
1133 aa
AA seq
DB search
MKPIQLKVAGLHSFREEQTVDFTKLCEGGVFGIFGPTGSGKSSLLDAMTLALYGKVERAT
NNTQGIMNHAEDLVFVSFTFDLSSQEGTKRFQVERSFKRTGDNTVKTTHCRFVEKQEETI
VLADKTSEVNQAIQDLLGLSIDDFTRAVVLPQGKFAEFLSLKGTERRQMLQRLFHLEKYG
DELHLKLRSRLQRSQNERNEIQAEQAGLGDASKEALEAAMKRSEDCEKKVQESQEALKDA
EKALEHTRKIWEWQSEKQQAVTQRKQLEQESSLIETYKQTLALHEKAGRLFPYVEELKAS
EQKKVDWTRKFENAQTQEQHIARVYEEKEEAYAKAKTAREQNEPIWLVKQEQFTRALELK
QWIEQEQKQVNESTETVEAVKLNLKNTEEQIEKETQLKSKGEQRQKELQQQLSELTISAD
ERNQMYDAIDGKKTLDQFLKQQTDFETEYKEKREQLRIEEEKENRWKNELEEGKEKIIQL
FFQTDTLYQMACDAERKMEQFLSVAKQCFEDEKKKLEEQKVQHLALQLSEQLEPGQPCPV
CGSEEHPNKSGEPEPYVVNEQKHQQLDQWQRDVNDWQHQVKQGKWQLERISEDIINDVSK
EEIALPAATVDLEKDAISPLTYEELEEQRKTIESEVKNMISQVADLDKVVKAEIVNYRHA
VEKRKQLHVIATERRQDLQSIAEKGKENAEKIKRERTRWEKTFPLFSLASLQESFEKMKE
TERKAEDVKKRLEASIPFLEQKEKDIQQLLEARNELSRKEASLVSQVEQMEKALQQKQSQ
LESIVGDQEPNELMLEVKQQLKQLKTGEEIAYQEYENVRKQWQEAKQQFAIAKEAKTEAV
TRYDQALKKWQEQQTDSSFATAEKVENAILPTEELKQISEKIETYTDKVKQVHHTIERLD
EALQGRTITEEDWHKQNELVHEGKEALHKAREEKGAAIEAVNELSQKHERYTKLETRREE
LNNKIETYGKLQTVMRGNTFVEFMAEEQLVQVSREASERLLVLTRGRYAIEVDSAGGFII
RDDANGGIKRPVTSLSGGETFLTSLALALSLSSSIQLRGQFPLEFFFLDEGFGTLDQDLL
DTVVTSLEKLHTSKLSVGIISHVPELQARLPRKLMVTPAEPSGKGSTVSIESM
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatccaactcaaagtagcaggccttcatagttttcgtgaggaacaaaccgtt
gatttcacaaaactatgtgaaggtggcgtatttggtatatttggtccgaccggtagtggg
aaatcgtcattattagatgcgatgacacttgctctttacggaaaagtcgaacgtgcgaca
aacaatacacaaggcattatgaaccatgccgaagatcttgtgtttgtttcatttacattt
gacttaagtagccaagaagggacaaaacgattccaggtggaacggagctttaagcgaacc
ggagataacacggtgaaaacaacacattgtcgttttgttgaaaaacaagaagagacgatt
gtgttagcggataaaacaagtgaagtaaatcaagcgatccaagatttattaggtctttcc
atagatgattttacgagagctgttgtgttaccacaaggaaagtttgctgagtttttatca
ttaaaaggaacagagcgtcgtcaaatgttgcagcgcttatttcatcttgaaaaatatggg
gatgaattacatcttaaattgcgaagtcgactgcagcgttctcaaaatgagcgaaatgaa
attcaagcagaacaagcaggacttggtgatgcttcaaaagaagcgctagaggcggcaatg
aaacgctctgaagattgcgagaaaaaagttcaggaaagtcaagaagcattaaaggatgca
gaaaaggcgttggagcacactagaaaaatttgggagtggcaatctgaaaaacaacaagct
gtgacacaacgcaaacagcttgaacaagaaagctccttaattgaaacatataaacaaaca
ttggcccttcatgaaaaagcgggtcgtctatttccatatgtagaagagctgaaagcaagt
gaacaaaagaaagtcgattggacacggaagtttgaaaatgcccaaacgcaagaacagcat
attgcaagagtgtatgaggaaaaagaagaagcttatgcaaaagcgaaaacagcacgtgaa
caaaatgagcctatatggcttgtgaaacaagagcaattcacgcgagctcttgaacttaaa
caatggatagagcaagaacagaagcaagtaaatgaaagtacagaaacggtagaagcggtt
aagcttaatctaaaaaataccgaagaacaaatcgagaaagaaacacaattaaaatcaaaa
ggtgaacaaaggcaaaaggaattacagcaacagctatcagaacttaccatttcggcagat
gagcgcaatcaaatgtatgatgccatcgatgggaaaaagacattggatcaattccttaaa
caacagactgacttcgaaaccgagtataaagaaaaacgagaacagttacgaatcgaagaa
gaaaaagaaaaccggtggaagaacgaactagaagagggaaaagaaaaaattattcaattg
tttttccaaaccgatactctttatcaaatggcatgtgatgctgaaaggaaaatggaacag
tttctttctgtcgcaaaacaatgctttgaagatgaaaaaaagaagctagaagaacaaaaa
gtacaacatttagcgttgcaattatcagagcaattagaaccggggcaaccatgtcctgtt
tgtggatcagaggaacacccaaacaaaagtggggaacctgagccgtatgttgtgaatgaa
caaaagcatcagcaattagaccaatggcaacgagacgttaacgactggcagcatcaagtg
aaacaaggaaagtggcaattagaacgcatctcagaagatatcatcaacgatgtttctaaa
gaggaaatcgctcttccagctgcgactgttgatttagagaaagacgcaatatcacccttg
acttatgaagaattagaggaacaaagaaaaacgattgagtccgaagtaaaaaacatgatt
agccaagtagcggacctcgataaagtggtaaaagcagaaattgtaaactatcgacacgcg
gtagaaaagagaaaacaactccatgtgattgcaactgaaagaaggcaagatctccaatca
attgccgaaaaaggaaaagaaaacgcggaaaaaataaagagagaacgaacacgctgggaa
aagacgtttccacttttttctttggcctctctccaagagtcttttgaaaaaatgaaagaa
acagaaagaaaagcggaagatgttaaaaagagactggaagctagtattccgttcctagaa
caaaaagaaaaagacattcaacaattgcttgaagcaagaaacgagctatcccgtaaagaa
gctagtcttgtttcacaagtcgaacaaatggagaaagcattgcagcaaaagcaaagccaa
ctcgaaagcatcgtcggtgaccaagagccaaatgagcttatgctagaagtgaaacagcaa
ctaaagcaattaaaaactggcgaagaaatcgcatatcaggaatatgaaaacgtaaggaaa
caatggcaagaggccaaacaacaatttgcaattgcaaaagaagcaaaaacagaagctgtt
actagatatgatcaagctttaaaaaaatggcaagaacaacagacagatagttcttttgcg
acggctgaaaaagtagagaatgcaattttgcctactgaggaattaaagcaaatcagtgaa
aaaattgaaacgtacactgataaagtgaaacaagttcatcatacaatcgagagacttgat
gaagcacttcaaggtcgtacgattacagaggaagattggcacaaacaaaatgaacttgtt
catgaagggaaagaagctttgcataaagcaagagaagaaaaaggtgcggcgattgaagca
gtaaatgagctttctcaaaaacatgaacgatacacaaaattagaaacacgaagagaagaa
ttaaacaataaaattgaaacgtacgggaaattacaaaccgttatgcgaggaaatacgttt
gttgaatttatggcagaagagcaactcgttcaagtaagtcgagaagcgtcagaacgattg
ctcgttttaacaagaggccgttatgcgattgaagttgattcggctggaggttttatcata
cgtgatgatgcgaacggcggcattaaacgtcctgttacatcattgtctggaggcgaaaca
ttcctcacttcacttgccttagcactttcattatcgtcatccattcaattgcgtggacaa
tttcctttagaatttttctttcttgatgaaggttttggaacgcttgaccaagatttattg
gatacggttgtcacgtctttagaaaaacttcacacttcaaaattatcagtcggcatcatt
agtcatgtcccagaactgcaagctagattacctagaaaactaatggtaacaccggcagaa
ccaagtgggaaaggaagcaccgtttcaattgaatcgatgtaa
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