Alkalihalobacillus sp. LMS39: MM271_03585
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Entry
MM271_03585 CDS
T09200
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
alkl
Alkalihalobacillus sp. LMS39
Brite
KEGG Orthology (KO) [BR:
alkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alkl03009
]
MM271_03585 (rlmD)
Enzymes [BR:
alkl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MM271_03585 (rlmD)
Ribosome biogenesis [BR:
alkl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MM271_03585 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
Cons_hypoth95
Methyltransf_11
TehB
Ubie_methyltran
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
UOE94740
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Position
722435..723829
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AA seq
464 aa
AA seq
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MKQNKARPQAIIEKGQNFPLTIKRLGINGEGVGYFKRTVVFVPGALPGEEVVAEVTNVHP
KFAEAKIKKIRKKSTDRVAPPCPIYKECGGCQLQHLSYEAQLREKKDIVRQAFERHTKLS
GDKLPLQDTIGMEDPWNYRNKSQLQVGKQKEKVLAGLYGLNSHNLIDISDCMVQHKETNT
VTQTVKRILQDLNISIYNERKRKGVIRTIVTRVGFNTGDVQLVLITSQKDIPKKELLLEE
IKKRLPQVISVLQNINGEKTSLIFGKETVHLHGEEVIQETLGDLNFELSARAFFQLNPIQ
TVKLYDEVKKAAELTGKEKVVDAYCGVGSIGLWLAKVAGEIRGMDVIKESIDDANNNANK
HGYDNATYVVGKAEEWLPKWVKEGWRPDVIVVDPPRTGCDEQLLKTIIKVKPKRFVYVSC
NPSTLAKDCDSLMKAGFEIKSLQPVDMFPHTSHIENVALLELKM
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaacaaagcaagaccccaagcaataatagaaaaaggacaaaatttcccactt
acgataaagcgactcggcattaatggtgaaggtgtcggttatttcaaacgaactgttgtc
tttgttccaggtgctctgccaggagaagaagttgtcgctgaagtcaccaacgtccaccct
aaatttgccgaagcgaaaatcaaaaagatacgaaaaaaatcaactgaccgcgtcgcccca
ccatgtccgatctacaaagaatgtggcggctgtcaactacagcatttatcgtatgaagct
cagttacgagaaaaaaaagacattgtccgtcaagcctttgaacggcatacaaaactaagc
ggagacaaacttccattacaggacacaattggaatggaagacccatggaattaccgtaac
aaaagccaactccaagtcggaaaacaaaaagagaaagtacttgcaggtctgtatggattg
aactctcacaatttaattgatatctcagactgtatggtccaacataaagaaacaaataca
gtgacacaaactgttaaacgaatattacaagatttaaacatttcaatttataacgagaga
aaacgaaaaggtgttatccgaacgatcgtgactcgggttggtttcaataccggtgatgtc
caacttgttttgattacatcacaaaaagacatacccaaaaaagagttactgctagaagaa
ataaaaaaacgactcccacaagtcatttcggtattacaaaacattaacggagaaaaaacg
tctcttattttcggaaaagaaacagtccaccttcacggtgaagaagtcattcaagaaacg
ttaggcgacttaaactttgaattatctgcccgagcattttttcagttaaatccaatacaa
accgtaaaactatatgatgaagtcaaaaaagcagccgaactaacaggaaaagaaaaagtg
gttgacgcatattgtggtgttggttcaattggattatggctagccaaggttgctggggaa
ataagaggaatggatgttataaaagaatccattgatgatgccaacaacaatgccaataag
catggttatgacaatgcgacatatgtcgtcggtaaagcagaagaatggctaccaaaatgg
gtgaaagaaggatggagaccagatgtaatcgttgtggatccaccgagaacaggctgtgat
gagcaattattaaaaacaattataaaggtaaaaccaaaacgatttgtgtatgtatcctgt
aacccatccacattggcgaaggattgtgatagcctaatgaaagcgggatttgagattaaa
tcgttgcagccggttgatatgtttccgcatacgagtcatatagaaaatgttgcccttctt
gaattgaaaatgtaa
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