Alkalihalobacillus sp. LMS39: MM271_08155
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Entry
MM271_08155 CDS
T09200
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
alkl
Alkalihalobacillus sp. LMS39
Pathway
alkl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alkl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MM271_08155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alkl03400
]
MM271_08155
Enzymes [BR:
alkl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MM271_08155
DNA repair and recombination proteins [BR:
alkl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MM271_08155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
T2SSE
HHH_5
AAA_28
Herpes_Helicase
DEAD
NTPase_1
AAA
nSTAND3
UvrD_C
YonJ_N
AAA_16
DUF4926
AAA_29
TsaE
Mg_chelatase
NPHP3_N
AAA_17
Motif
Other DBs
NCBI-ProteinID:
UOE95566
LinkDB
All DBs
Position
1711468..1713750
Genome browser
AA seq
760 aa
AA seq
DB search
MSQQVPLHEDETSYIKGEVSHIIFHNPDNYYTVAQVFVLQSSEKLKEKTVPVVGILPTVE
PNGVYIFSGDFAEHPRFGLQFKVNAFSRDVPRTAAGVIQFLSSDRFPGIGKKTAETVVEA
LGEKALSKILADRNVLQDVPKLPADKAAVLYNQLVEFQGVEQLITELSQYGFGLELTMKI
FQTYKEEALTIIRSSPYKLIHDVEGIGFKRADLLGEAIGLTGNHPDRIKAGCVYFLHELC
MQEGHVFLYKHDLCKEVSSMLSSETVVIEEAEVSTQLLALHEEDKIVMEEERVYLSSLFF
AEKGIVTNVKRLINSEKDNEYPESEFYKALGELEELEKMEYAPTQREAIKTAITSPAMIL
TGGPGTGKTTVIKGIVEVFAKLHGYSLEPKDYKKDEPFPVLLVAPTGRAAKRMGEATGLP
SLTIHRLLGWKGGNGGFERDEDSPLEGRLLIVDEVSMVDIWLANQLFKSIPDTMQVVLVG
DQDQLPSVGPGQVLRDFIDANVIPIVALTEIYRQAEGSSIIDLAHEIKSGTLPDNFHVQQ
KDRSFFPCSIPQVHQVIEKVCSNAMKKGYSAKEIQVLAPMYRGVAGIEELNRKLQQLFNP
KKDGRREIQFGDLIYRTGDIVLQLVNNPEEQVYNGDRGEIVAIFYAKENTEKQDQVLVSF
DGIEILYTRKDLIQLTHAYCTSIHKAQGSEFPIVIMPVVKGYHRMLRRNLIYTGVTRAKQ
FLILCGEIEAWEMAAKQQGDGERHSMLVDKLKQTVMEKAD
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacaagttcctttgcatgaggatgagacttcttatataaaaggtgaagtaagt
catattatttttcataacccagataattattatacggtcgctcaagtgtttgttttgcag
tcctctgaaaagctaaaagaaaagaccgtgccagtcgttgggattctgcctacagtagag
ccgaatggtgtttatatttttagtggggattttgcagaacatccacgctttgggcttcag
tttaaagtcaatgcattttcaagagatgttccaagaactgcagctggtgtcattcaattt
ttgtcaagcgatcgttttcctggaatcgggaaaaaaacagcagaaaccgtagtcgaagcg
cttggagaaaaagcgttatcgaaaattttagccgaccgcaatgtgcttcaagatgttcct
aaattgccagcagacaaggcggctgttttatataatcaacttgttgaatttcaaggggtt
gaacaattaattaccgaattatcacagtatggttttggtttagaattgacgatgaaaata
tttcaaacgtataaagaagaggcacttacgattattcgctcaagtccatacaagcttatt
catgatgtggaagggattggatttaaacgggctgatttattaggggaagcgattggatta
acgggaaatcatcctgaccgaattaaagcagggtgtgtttattttcttcatgagttatgc
atgcaagaaggtcatgtgtttctatacaaacatgatttatgtaaagaagtaagctccatg
ttatcgtctgagactgttgtgatcgaagaggcagaggtttccacacaattacttgcctta
catgaagaagataaaatagtgatggaagaagagcgtgtctacttatcttcattatttttt
gcggaaaaaggtatcgtcacaaacgttaaacgattaataaacagtgaaaaagataatgaa
tatcctgaatcagagttttacaaggcgttaggtgaacttgaagagctagaaaaaatggag
tatgcaccaacgcaaagagaagcgataaaaacagcgattacgtcaccagcaatgatttta
accggtggaccaggaactgggaaaacaacagtcataaaaggaattgttgaagtgtttgca
aagctccatggttattcactggaaccaaaggattataaaaaggacgagcctttccccgtg
ttacttgttgctcctacaggaagggcggcgaaacgaatgggcgaagcaaccggattacct
tcccttaccattcatcgtttattaggatggaaaggtggcaatggtggttttgaacgtgat
gaagacagtccactagaaggccgtttactcattgttgatgaagtatcgatggtcgatatt
tggttagcgaatcaattatttaaatcgattcctgatacgatgcaagttgtactcgtaggt
gaccaagaccagctaccttctgttggtccaggacaagtattacgggattttattgatgca
aatgtcattcccattgttgctttaacagagatttatcgccaggcagaagggtcgtcgatt
attgatttagcgcatgaaattaaaagtggaactcttcctgacaattttcatgtgcaacaa
aaggatcgaagtttttttccatgtagtattccgcaagttcaccaagtcattgaaaaagtg
tgttcaaatgcaatgaaaaaaggctatagtgctaaagagattcaagtgttagccccaatg
taccggggagtggcaggaattgaagaactaaaccgtaagttgcagcaattatttaacccg
aaaaaagacggcagacgagagattcaatttggtgatctgatttacagaacaggtgatatt
gtattgcagttagtaaacaatcccgaagaacaagtgtataatggggaccggggtgaaatt
gtcgcgattttttatgcgaaagaaaacactgagaagcaagaccaagttctcgtttccttt
gatggaattgagattttatatacgaggaaagatttaattcaacttacccatgcgtattgt
acatcaattcataaagcgcaaggaagtgaattcccgatcgtcatcatgcctgttgtaaaa
ggatatcatcggatgttaagaagaaaccttatttatacaggagtaacaagagcaaagcaa
tttctcattttgtgtggtgaaatcgaggcgtgggaaatggcagctaaacaacaaggtgat
ggtgaacgccattcgatgttagtagataagctaaaacaaacagttatggaaaaagcagac
tag
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