Alkalihalobacillus sp. LMS39: MM271_08835
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Entry
MM271_08835 CDS
T09200
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
alkl
Alkalihalobacillus sp. LMS39
Brite
KEGG Orthology (KO) [BR:
alkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alkl03019
]
MM271_08835
03009 Ribosome biogenesis [BR:
alkl03009
]
MM271_08835
Enzymes [BR:
alkl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MM271_08835
Messenger RNA biogenesis [BR:
alkl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MM271_08835
Ribosome biogenesis [BR:
alkl03009
]
Prokaryotic type
rRNA helicases
MM271_08835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
MreB-like_C
Helicase_RecD
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
UOE95693
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All DBs
Position
1839790..1841106
Genome browser
AA seq
438 aa
AA seq
DB search
MMESNFTRFEIKDFIIKSIQEQGFTMPTEIQERLIPAIRGGKDVIGQSQTGSGKTLAFLI
PIIDRIDESKDEVQAVITAPTRELASQIYDELQLLLKYDEDRIATRLLVGGTDRLRTIDR
LKSVPHIVVGTPGRINDMVDEQALQLHTATMLVVDEADQMLDMGFISDVDKTASRMAEQL
QMLVFSATIPEKLQPFLKKYMNQPRHVHVKPKNATAPTIEHRLIPLRHRDKIELTVQIAT
LVNPYLALLFTNTKEQADELTGAMASAGLNVEAIHGGLLPRQRKQVMKQVKDGKIQYVVA
TDLAARGLDIKGVSHVINFAIPKDLDFYVHRVGRTARAGEDGIAITIYDEQDHASIEKLM
KRGIDFSFSDVKKGEWVELEKPRLGSLTRTKKTTSSSQAGHGVARAKPKKVKPGYKKKAR
WEQEKVARRERRLNRKKK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgatggaatctaattttacacgttttgaaattaaagactttattattaagtcgatacaa
gaacaagggtttacgatgccaacagaaatacaagaacgtttaatcccagctattcgaggt
gggaaagatgttattggacaatcgcaaaccggctctgggaaaacgttagcgtttcttatt
ccgattattgataggattgatgaatcgaaagatgaagttcaagctgttattacagcaccg
acacgagaattagcttcgcaaatatatgatgagctacagctattgcttaaatatgacgag
gatcgtatagcgacaagattattagtaggtggaacagaccgtctgcgaacgatcgaccgt
ctaaaatcagttccccatattgtcgtagggacaccgggtagaatcaatgatatggtggat
gaacaagcgttacaattgcatacggctacaatgcttgtcgttgatgaagcagaccaaatg
ttagatatgggctttattagtgatgtagataaaacagcttctagaatggcagaacagtta
caaatgctcgttttttctgccacaattcctgaaaaactccagccgtttttaaagaaatat
atgaatcagccgcgccatgtacatgttaagccaaaaaacgcaacggcaccaactatcgag
catcgcttaattccgctgcggcatcgggacaaaattgagctaacggttcaaattgcaaca
ttagtgaacccttatttggccttgctgtttacaaacacaaaagaacaagccgatgaatta
acaggggcaatggcttccgctggattaaatgtagaagcaatacatggtggcttgttacct
cgacaaagaaaacaagtgatgaaacaagtgaaagatggaaaaattcaatatgttgtagcg
acagacttagctgcaagagggttagatatcaaaggggtttcgcatgttattaattttgct
ataccgaaagacttagatttttacgttcatcgtgtcggtcgaacagcccgtgctggggaa
gacgggattgcgattacgatttatgacgaacaagaccatgcttcgatcgaaaaattaatg
aaacgtggcatcgatttctccttttctgatgtgaaaaaaggggaatgggtcgaacttgaa
aagcctagattagggtcgttaacaagaacgaaaaaaacaacttcttcatcacaagctggg
catggtgttgcgagggccaaaccgaaaaaagtaaagccaggatataaaaagaaagcaaga
tgggagcaagaaaaagttgctcgtagagaaagaagattaaaccggaaaaagaaataa
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