Alkalihalobacillus sp. LMS39: MM271_12055
Help
Entry
MM271_12055 CDS
T09200
Name
(GenBank) phytoene/squalene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
alkl
Alkalihalobacillus sp. LMS39
Pathway
alkl00100
Steroid biosynthesis
alkl00909
Sesquiterpenoid and triterpenoid biosynthesis
alkl01100
Metabolic pathways
alkl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
alkl00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
MM271_12055
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
MM271_12055
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
alkl01006
]
MM271_12055
Enzymes [BR:
alkl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
MM271_12055
Prenyltransferases [BR:
alkl01006
]
Terpene biosynthesis
Squalene/phytoene synthase
MM271_12055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
ExsD_C
Motif
Other DBs
NCBI-ProteinID:
UOE92004
LinkDB
All DBs
Position
complement(2428867..2429703)
Genome browser
AA seq
278 aa
AA seq
DB search
MKEKVKLQKTAKEMLKATSRTFYIPISALPNELKEAVTSAYLCMRAIDEIEDHPQFPAEQ
KIKLLRNISELLENPTVELEQQLTNQFEPYTHILPSVTLQLYDWIVVCPQEVQPNVLHYT
AVMAKGMADWVEKGFEVTNEQDLDDYTYYVAGLVGELLSELWAWYDNVETDQELAVAFGR
GLQAVNIIRNRDEDLERDGVDFFPEGWDRKEMFNYARKNLALGLRYMENLKPGPIYNFCK
IPHALAQGTLEAIEKGREKLSRTEVVKIVGRVAKEQIL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaagtaaaattacaaaaaacagcaaaagagatgttaaaagcaacaagtcgg
acgttttatattcccatcagtgcattacctaatgaattaaaagaagcagtcacatccgct
tatctttgcatgagagcgattgatgaaatagaagaccacccgcaatttcctgctgaacaa
aagattaaattattacggaacattagtgaactgttagaaaatccaacagtagagttagaa
caacaattaacaaatcagtttgaaccatatactcacattcttccatcagtcacgttacag
ctttatgactggattgttgtttgcccacaagaagtacaaccaaatgtgttgcattataca
gcagttatggccaaagggatggcagattgggtagaaaaaggctttgaagtgacaaacgaa
caagacctggacgactatacgtattatgttgctgggcttgttggagaattattatccgaa
ctatgggcttggtatgataatgttgaaacagaccaagaattagccgtggcattcggacga
ggtctacaagctgtcaatattatacgtaatcgtgacgaggatttagaacgggatggcgtt
gactttttccctgaaggttgggaccgaaaagaaatgtttaactatgcacgcaaaaacctc
gctttaggtttgcgttatatggaaaacttaaaaccaggaccaatttataatttttgcaaa
atcccccacgcccttgcacaaggtacgttagaagcgattgaaaaaggaagagaaaaactt
agccgaacagaagttgtaaaaattgtgggccgagtggcaaaagaacaaatcttataa
DBGET
integrated database retrieval system
