Alkalihalobacillus sp. LMS39: MM271_16425
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Entry
MM271_16425 CDS
T09200
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
alkl
Alkalihalobacillus sp. LMS39
Brite
KEGG Orthology (KO) [BR:
alkl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alkl03016
]
MM271_16425 (truB)
Enzymes [BR:
alkl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MM271_16425 (truB)
Transfer RNA biogenesis [BR:
alkl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MM271_16425 (truB)
Prokaryotic type
MM271_16425 (truB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UOE96476
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Position
complement(3317975..3318832)
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AA seq
285 aa
AA seq
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MKMRKILRTKKVGHTGTLDPQVTGVLPICVGRATKVAEYMSDYPKTYIGEVTIGTSTTTE
DAYGELVEQCDVTTPITKIQIEEVCRQFLGTIIQVPPMYSAVKVNGKKLYEYARANKEVE
RPKREVTIYDLHVDGDVHYDGKQVTFRFGVHCSKGTYVRTLAVDIGKQLGYPAHMSELQR
VASGPFTLENCVTFEEIEQKQQEDLLSAIVFPLEKAIAHFPSIQVCDELVSKIKNGAVLP
LSKEIDADRFTVYNKEGDCLAIYTKHPTKPGLMKPEKMLVIQSEN
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaggaaaatccttcgaacgaaaaaagtgggtcatacaggaacgctcgaccct
caagtgactggcgttttgccgatttgtgtcggtcgagcaacaaaagtagctgaatatatg
agtgattatccgaaaacatacataggtgaagtgacgatagggacatcaacgacaacagaa
gatgcgtatggtgagcttgttgaacaatgtgatgtcacaacaccgataacaaaaattcaa
attgaagaagtatgtcgccaatttttaggaacgatcattcaagtaccaccgatgtattct
gcagtaaaagtaaatggaaaaaaattatatgaatatgcaagagcaaacaaagaagtcgag
cgaccaaaacgggaagtcacgatttatgatttacatgtcgatggtgatgttcactatgat
ggtaaacaagtcacatttcgatttggcgtccattgcagtaaaggtacgtatgtgagaaca
ttagctgtcgatatcggaaaacagttaggatatccagctcatatgtcagaattacaaagg
gtggcatcgggaccgttcacactagaaaactgtgtgacctttgaagaaatcgagcaaaag
caacaagaggacctcttatcagcaatcgtctttccgctagaaaaagcaattgctcatttt
ccttcgattcaagtttgcgatgagcttgtttcaaaaataaaaaatggtgcggtgttaccg
ctgagcaaagaaatagatgcagaccgttttactgtatataataaagaaggagattgttta
gcaatatacactaaacatccaacaaagccaggactcatgaaaccagaaaaaatgttggtg
attcagtctgaaaattaa
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