Alkalihalobacillus sp. LMS39: MM271_19805
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Entry
MM271_19805 CDS
T09200
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
alkl
Alkalihalobacillus sp. LMS39
Pathway
alkl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alkl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MM271_19805 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alkl03400
]
MM271_19805 (mutM)
Enzymes [BR:
alkl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MM271_19805 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MM271_19805 (mutM)
DNA repair and recombination proteins [BR:
alkl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MM271_19805 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
UOE93410
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All DBs
Position
complement(4007475..4008299)
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AA seq
274 aa
AA seq
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MPELPEVETVKRTLQQLVIGKTIDSVDIRWPKIIKKPDDIKQFEFLLQGQTIEKIDRRGK
FLKFVFTDYVLVSHLRMEGRYGLFQKTDEINKHVHVIFTFTDKTELRYQDVRKFGTMHLF
VKGEEEKVMPLSQLGVEPFSSEFTPELLLSSFKHTNRKVKVVLLDQKTVVGLGNIYVDEA
LFRANIYPETFAKDITKKQAKKLHQEIIHTLQEAVDQGGSSIKSYVNGQGDMGFFQQYLL
VYGRENEPCRVCGTPISKTVVGGRGTHYCHRCQK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacctgaagtagaaacagtaaaacgaacgttacaacaattagttataggc
aagacaattgattccgtggacattcgttggcctaaaataataaaaaaaccagatgatata
aaacagtttgaatttttattacaaggacaaacgattgaaaaaattgatcggcgagggaaa
tttttaaagtttgttttcaccgactatgttcttgtttcacatttacgaatggaaggtaga
tatggtttatttcagaaaacagacgagataaataaacatgttcatgttatttttaccttt
acagacaaaaccgaattgcgttaccaagacgttcgtaaatttggaacgatgcatttattt
gtgaaaggcgaagaagaaaaagtgatgcctctttctcaattaggggtagaaccattttcc
tctgaattcacgccggaattattgctatcttcctttaaacatacgaatcgaaaagtgaaa
gtagtactattggatcaaaaaacagtcgtcggtttaggaaatatttacgtagacgaagct
ttgtttcgagcaaatatttatccagaaacatttgcaaaggatattacgaagaaacaagct
aaaaagctacatcaagaaattattcatacgttacaagaagctgttgaccaaggaggaagc
tcgattaagtcttatgtaaatggtcaaggagatatgggatttttccaacaatatttgctt
gtttatggaagggaaaatgaaccttgccgtgtttgtgggacgccaatttcaaaaacagtc
gttggaggaagaggaacgcattattgccatcgttgccaaaaatga
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