Alkalihalobacillus sp. LMS39: MM271_19810
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Entry
MM271_19810 CDS
T09200
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
alkl
Alkalihalobacillus sp. LMS39
Pathway
alkl03030
DNA replication
alkl03410
Base excision repair
alkl03420
Nucleotide excision repair
alkl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alkl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MM271_19810 (polA)
03410 Base excision repair
MM271_19810 (polA)
03420 Nucleotide excision repair
MM271_19810 (polA)
03440 Homologous recombination
MM271_19810 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alkl03032
]
MM271_19810 (polA)
03400 DNA repair and recombination proteins [BR:
alkl03400
]
MM271_19810 (polA)
Enzymes [BR:
alkl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MM271_19810 (polA)
DNA replication proteins [BR:
alkl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MM271_19810 (polA)
DNA repair and recombination proteins [BR:
alkl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MM271_19810 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MM271_19810 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Enkurin
Motif
Other DBs
NCBI-ProteinID:
UOE93411
LinkDB
All DBs
Position
complement(4008311..4010932)
Genome browser
AA seq
873 aa
AA seq
DB search
MLNKLILVDGNSIAYRAFFALPLLNNEKGVYTNAVYGFTTMLLKIIEEEKPTHMLVAFDA
GKTTFRHNTYGEYKSGRQKTPHELSEQFPYIRKVLDAFNISRFELENYEADDIIGTISKR
AEQENWNVKVFSGDKDLLQLVSNHVTVSLTRKGITNVETYDEKALEEKYGISPLQIIDMK
GLMGDSSDNIPGVPGIGEKTALKLLKEYHSVEQVLQSIDKISGKKMKERLEENQEQALMS
KELATIFRDVPVNIEFAEMTFENPDKQEIITLFKELEFNSLLERVGGEEQQSTMTKEEVK
YEVISEVTDQLSSPAAVVIEVLEENYHQADIVGVAIANEKGKFYLTEQALQSEAFYAWAK
SDNKKWVFDAKKATVALGWQGIELNGIDFDFLIASYILDPSVSSHELADISKRQGKQLVD
YDEAVYGKGAKRKVPENDTLEQHLIRKAQTMFELKDTLEKELQENEQYELCKELEMPLSV
ILGKMESTGVKVDTAVLDKMGEELAEKLAKLENSIHELAGQSFNINSPKQLGEILFEKLG
LPALKKTKTGYSTSADVLEKLKDKHEIIEQILHYRQLGKLQSTYIEGLTKVVHKNTKKIH
TIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRKAFVPSETDWLILAADYSQIELRVLA
HIAKDDKLISAFNENMDIHTKTAMDVFHVKEEDVTSDMRRGAKAVNFGIVYGISDYGLSQ
NLNITRKEAAEFINRYFETYPKVKEYMDNIVELAREKGYVTTLLHRRRYLQDITSRNFNL
RSFAERTAMNTPIQGTAADIIKKAMVDMATRLEKEKLQSRLLLQVHDELIFEVPKDELEL
MKKIVPEVMEQALALEVPLKVELEYGKTWYDAK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataaactcatattagtagatggaaatagtattgcttaccgagcattttttgcg
ttgcctttgttaaacaatgagaaaggtgtgtatacaaatgctgtgtatggctttacaaca
atgttgttaaaaatcattgaagaagaaaaaccgacacatatgcttgttgcatttgatgca
ggtaaaacaacgtttcgtcataatacatatggagaatataaaagtggtcgtcaaaaaacg
ccccatgagttgtcagaacaattcccgtatattcgcaaagtattagatgcgtttaacatt
tctcgttttgaattagaaaactatgaagcagatgatattattggaaccatttcaaaacgc
gccgagcaagaaaattggaatgtaaaagtgttttcaggagataaagatttacttcagctt
gtttcgaatcatgtaacggtttctttaactcgaaaaggaataacaaatgtagaaacatac
gatgaaaaagcacttgaggaaaaatacggaatatctcctctacaaattattgatatgaaa
ggattaatgggcgatagttcagataatatcccaggtgtaccagggattggggaaaagaca
gcattaaaattattaaaagaatatcattcagttgaacaagtattgcagtcgattgataaa
atttcaggaaaaaaaatgaaagaacggttagaggaaaatcaagaacaagcattgatgagt
aaagaattagcaacaattttccgagatgttcccgtcaatattgagtttgccgagatgaca
tttgaaaatccagacaaacaagagattattacgctttttaaagaattggagtttaactct
ttattagaacgggttggcggagaagagcaacaatctacaatgacgaaagaagaagtcaaa
tatgaggttatttctgaagtaacagaccaactaagcagcccagcagcagtagtcattgaa
gtattagaggaaaactatcatcaagctgacattgttggagtagctatagcaaacgaaaag
ggtaagttttatttaacggaacaagcacttcagtcagaagcattttatgcgtgggctaag
agtgataataagaagtgggtatttgacgctaagaaagcaaccgttgccttaggctggcaa
ggcattgaattaaatggcattgattttgactttttaattgcttcctatatattggaccct
tctgtttcttcccatgaactagctgatattagtaagcgacaaggcaagcagcttgttgat
tatgatgaagctgtgtatgggaaaggagcaaagcgaaaagtacctgaaaatgatacactt
gagcaacatttaatacgaaaagcgcaaacaatgtttgagttaaaagatacattagaaaaa
gaattacaggaaaatgagcaatatgaattgtgcaaagaacttgaaatgccgctttccgtc
attcttgggaagatggaatcaacaggagtgaaagtcgatacggctgtcctcgataaaatg
ggtgaggaattagccgaaaaactagcaaagcttgagaattccattcatgaattagctggt
cagtcatttaatattaattcaccaaaacagttaggtgaaatattatttgaaaaactagga
ctccctgctttgaaaaaaacaaaaacaggatattctacttctgcagatgttcttgaaaaa
ttaaaagataaacatgaaataatagaacaaattcttcattatcgtcaacttggaaagctt
caatcgacttatattgaaggactaacaaaggtcgttcataaaaatacaaaaaaaattcat
acgatctttaaccaggctcttacacaaacagggcggttaagttcaaccgagcctaatctg
caaaacattccgattcgtctagaagagggacggaaaataagaaaggcgtttgttccatct
gaaacagattggctcatattagcagctgactattctcaaattgagttaagagttttggct
catattgcaaaagatgataaattaatttctgcttttaacgaaaacatggatatccatacg
aaaacagcgatggatgtgtttcatgttaaggaagaagatgtgacgtctgacatgagacgt
ggagcaaaagcagttaactttggcattgtatatggcataagtgattatgggctatcgcaa
aatttaaatatcacaagaaaagaagcagctgaatttattaatcgatattttgagacgtat
ccgaaagtaaaagaatatatggacaatattgtggaacttgcaagagaaaaagggtatgtc
acaacattgcttcatcgtcgtcgatatttacaagatattacgagtcgtaattttaacttg
cgaagctttgctgagcgtacagcgatgaatacaccgattcaagggacagcggctgacatt
ataaaaaaagcgatggtcgacatggcaacaaggcttgaaaaggaaaagcttcaaagtcga
ttattgttacaagtacacgatgagttaatttttgaagtgccaaaagatgaactagaactg
atgaaaaaaatcgttcctgaagtcatggaacaagcattagcgttagaagttcctttaaaa
gtagaacttgagtacggaaagacttggtatgatgctaaataa
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