KEGG   Alkalihalobacillus sp. LMS39: MM271_22500
Entry
MM271_22500       CDS       T09200                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
alkl  Alkalihalobacillus sp. LMS39
Pathway
alkl03030  DNA replication
alkl03430  Mismatch repair
alkl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:alkl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MM271_22500
   03430 Mismatch repair
    MM271_22500
   03440 Homologous recombination
    MM271_22500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:alkl03032]
    MM271_22500
   03400 DNA repair and recombination proteins [BR:alkl03400]
    MM271_22500
Enzymes [BR:alkl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MM271_22500
DNA replication proteins [BR:alkl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MM271_22500
DNA repair and recombination proteins [BR:alkl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MM271_22500
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DEDDh_C
Other DBs
NCBI-ProteinID: UOE93910
LinkDB
Position
complement(4592306..4592962)
AA seq 218 aa
MFWKKKKLHYTLDHQPPLNKKLKDMSFTIFDTETTGFAVGAKDRLLEIGAVHVEGLQVTD
MTFHSYVNPEREIPKEIKSLTGITEEKVKEAPKALEAIEQFFQFIEASESAGWVGHYVSF
DVLVLKKELKREKHTFEQPQFIDTLDLIGYLNPSWDMRDLSHYARTFGTNMFERHSAIGD
ALTTAYLFVEMLRLLEERGKTTLADLLHITDNPSKALL
NT seq 657 nt   +upstreamnt  +downstreamnt
atgttttggaaaaagaaaaaactccattacacacttgaccaccaacctccattaaataaa
aagttaaaagatatgtcatttacaatttttgatacagaaacaaccggctttgctgtcgga
gcaaaagaccgcttattggagattggggctgtccatgtcgaagggttacaagtaacagat
atgacgtttcattcttatgttaatccagaacgagagattccaaaagagattaaaagttta
acaggaattacagaagaaaaagtgaaagaagcaccaaaggcattagaagcaattgaacag
ttttttcaatttatcgaagcttccgaaagcgcgggatgggtcggacattatgttagcttt
gatgttcttgttttaaaaaaagaactcaaaagagaaaagcatacatttgaacagccgcag
tttatcgatacactcgatttaatcggctatttaaatccgtcatgggatatgcgagattta
tcccactatgcccgcacgtttggcacaaatatgtttgaacgccatagtgcgatcggcgat
gctttgacaacggcatatttgtttgttgaaatgcttcgattgcttgaagaacgcggaaaa
acaacgctcgctgatttacttcatattacagataatccgagtaaagcactcctataa

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