Alkalimarinus alittae: NKI27_00280
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Entry
NKI27_00280 CDS
T08567
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
alkm
Alkalimarinus alittae
Pathway
alkm03030
DNA replication
alkm03430
Mismatch repair
alkm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NKI27_00280
03430 Mismatch repair
NKI27_00280
03440 Homologous recombination
NKI27_00280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alkm03032
]
NKI27_00280
03400 DNA repair and recombination proteins [BR:
alkm03400
]
NKI27_00280
Enzymes [BR:
alkm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NKI27_00280
DNA replication proteins [BR:
alkm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NKI27_00280
DNA repair and recombination proteins [BR:
alkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NKI27_00280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UZE96217
UniProt:
A0ABY6N2J3
LinkDB
All DBs
Position
62670..63392
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AA seq
240 aa
AA seq
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MSDYESNVPSPLAWPNYYAAQSKRCKDARLKAFFDAGVVDPQTPLNEVPFLAMDFETTGL
DPREHGIVSVGMVPFTLSRIRCRNASHFIVKPRQTLLPKSVTIHGITHSDVKSAPDLDEV
LHDVLPMLAKQVVVVHYRHIERDFLNLALLTRIQEEMFFPVIDTMLLEEQILQKQRSVVA
SLLGQRSTLSLRLPDIRERYGLPRYNLHHALTDALATAELLQAQIAHHFDDKTPISQLWC
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattatgaatccaacgttccgtcgccattagcctggccaaactattacgccgcg
cagtctaaacgttgtaaagatgcacgcctaaaagcgttttttgatgcgggtgtggtagac
ccccaaaccccgttgaatgaagtgccttttttggcgatggacttcgaaaccaccggtttg
gacccccgtgagcatggcatcgtaagtgtgggaatggtgccgttcacgttgtcacgtatt
cgctgtcgcaacgctagccactttatcgtaaagcctcggcaaacacttttgcccaagtca
gtcaccattcacggtattacccattctgatgtgaaatcagcgccagaccttgatgaggtg
ctgcatgacgttctgccgatgttagcaaagcaggttgtggtggtgcattaccggcatatt
gagcgagatttcttaaacttagccctgttgacgcggattcaagaagagatgttcttccct
gtgattgataccatgctactagaagagcagatactgcaaaagcagcgaagtgttgttgcc
agtttactagggcagcgctcgacgttgtcgctacgcttaccggatatacgtgagcgttat
ggtttaccccgttataacttacaccacgcgttgaccgacgctttagcaacagcggagctt
ctgcaagcgcaaattgcacatcactttgatgataagacgcctatatcgcagctttggtgt
tag
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