Alkalimarinus alittae: NKI27_01860
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Entry
NKI27_01860 CDS
T08567
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
alkm
Alkalimarinus alittae
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
NKI27_01860
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Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
OB_PDCD11
T2SSK
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UZE96519
UniProt:
A0ABY6N3A9
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Position
427708..430050
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AA seq
780 aa
AA seq
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MDKISQRIADEIGVKVQQITAAVGLLDEGATVPFISRYRKEVTGSLDDTQMRQVEERLRY
LRELEGRRESILNSIREQDKLTTALEQNILAAETKTILEDLYLPYKKKRRTKGQVAREAG
LEPLADKIIDNPELDPEKEAEAFLNVDAGIVDVKAALDGAKFILMERFSEDAALLGRLRS
FLWQEGEVQVSVVEGKELEGAKFRDYFEHREALKKMPSHRALAIFRGRNEGFLNYSIVVG
DSDANRKVSHPCESMVAEHWSIKNKGRAADKWLNEVVRWTWRIKLSTHLETELMGQIRER
AEEDAIKVFASNLKDLLLAAPAGPKATLGLDPGLRTGVKVAVVDATGKVLDHCAIYPHAP
QKKWQQSLDILATLCAKHNVELISIGNGTASRETDKLAAELMTQHPELKLTRITVSEAGA
SVYSASEYAAKEFPDLDVTIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQAQMA
RSLDAVVEDCVNAVGVDLNTASAPLLTRVSGLNPVIANNIVEYRNANGAFTGRRELKKVP
RLGEKTFEQAAGFLKVMNGKNPLDASSVHPEAYDLVKQIAEKNSRKVDAIIGDSAFLKDV
KAQDYVSDKFGIPTIKDIISELDKPGRDPRPEFRFAAFQEGVEKITDLKPGMILEGAVTN
VTNFGAFVDVGVHQDGLVHISALSNTFVKDPREVVKAGDIVKVKVMELDVPRNRIGLSMR
LSDEPGVDPKKDVAARGAGSRRTEPKQGDRNRQQSSGSSTPSAMAGALALAMNSAKKNKQ
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatttctcaacgcattgctgatgagatcggcgtaaaagtccaacaaattacg
gcagcggttggcttactagatgaaggtgcaacagtgccatttatttctcgttatcgtaaa
gaggtgacggggtcgttagacgatactcagatgcgtcaagtagaggagcgtttgcgttat
ttgagagagcttgaagggcgcagggaaagcatccttaatagcattagagagcaagacaag
ttaacaactgcgctcgagcagaatattctggctgcagagacaaaaaccatactcgaagac
ctttatttaccatataagaagaaacgacgaacaaaaggccaagttgctcgagaagccgga
ttagagccgttagcagataaaattatcgacaatcccgaacttgatccagagaaagaggca
gaagcctttttaaatgtggatgccggcatagttgatgtcaaagctgcactggatggtgct
aaatttatcttgatggaacggttcagtgaagatgccgcgttactgggacgattgcgctca
tttctttggcaagaaggcgaagttcaggtatccgtggttgaaggcaaagagctagaaggt
gccaagtttcgagattactttgagcaccgtgaagcgcttaaaaagatgccttcgcatcgc
gcgttagcgatttttagaggacgtaatgaaggtttcttaaactacagtatcgtagtcgga
gatagcgatgctaaccgcaaagtttcgcacccttgtgagtcaatggtggcggagcattgg
agtattaaaaacaaaggccgtgcagccgacaaatggttaaacgaagtggttcgatggaca
tggcgtattaagttaagcacccacctcgaaactgaactaatgggacaaatcagagagcgt
gctgaagaagatgcaatcaaggtctttgccagcaacctaaaagacctattgctagccgcg
cctgcgggtccaaaggcgacgctaggtcttgatccaggtttacggacgggtgttaaagtt
gccgtggttgacgcaacaggaaaggtgcttgaccactgtgctatttatccacatgcaccg
cagaaaaagtggcagcaatctctcgatattctggcgacgctttgtgcaaagcataacgta
gagttgattagtattggtaacggtacggcttctcgtgaaaccgataagttagccgcagag
ctgatgactcagcacccagaattgaaattaacgcgtattactgtcagtgaggcaggcgct
tctgtttattctgcgtctgaatatgctgcaaaagagttccctgatttagatgtgactatt
cgaggtgcggtatcgattgcacgccgtttacaagacccattggctgagctagtaaagatt
gacccaaaatctattggtgtgggtcaatatcagcatgatgtaagtcaggctcaaatggcg
cgaagccttgatgcggtagtcgaggactgtgtaaacgcggtgggggtagacttaaatact
gcatctgccccgctgctcactcgcgtatcgggcttgaaccctgtgattgccaacaatatt
gttgaataccgtaatgcgaatggcgcctttacaggtaggcgcgagctgaaaaaagtacct
cgcctcggtgaaaaaacatttgagcaagccgccggatttttaaaggtgatgaatggtaaa
aatccactcgatgcgtcttcggttcaccccgaagcttatgatttggttaaacagattgcc
gaaaagaatagccgtaaagtggatgctattattggcgattctgcatttttgaaagacgtt
aaagcgcaagattatgtgagtgataagttcggtatcccgactattaaagatattatttca
gagttagataagcctgggcgtgaccctaggcctgaattccgttttgctgcgtttcaggaa
ggtgtcgaaaaaattaccgaccttaagcctggcatgatattggaaggggcagtgaccaac
gtcacgaattttggtgcgtttgttgatgtgggtgttcatcaagatggcttagtccatatt
tctgcattatctaatacctttgtaaaagacccgcgagaagtggttaaagcgggagacatc
gtgaaagtgaaggtgatggagttggatgtgccacgaaaccgtattggcttgtctatgcgg
ttgagtgatgagccgggggttgaccctaaaaaagatgtggctgctcggggggcaggttca
agaaggacagagccaaagcaaggtgatcgcaatcgtcagcaaagcagcggtagcagtacg
ccaagtgctatggcgggtgcgctcgctttggcaatgaactcagcaaaaaagaataagcaa
taa
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