Alkalimarinus alittae: NKI27_03650
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Entry
NKI27_03650 CDS
T08567
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
alkm
Alkalimarinus alittae
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alkm03016
]
NKI27_03650 (truB)
Enzymes [BR:
alkm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NKI27_03650 (truB)
Transfer RNA biogenesis [BR:
alkm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NKI27_03650 (truB)
Prokaryotic type
NKI27_03650 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UZE96855
UniProt:
A0ABY6N4C5
LinkDB
All DBs
Position
832154..833092
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AA seq
312 aa
AA seq
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MGRRKKGRKISGVLLLDKPTGITSNKALQKVRWLFDANKAGHTGNLDPLATGVLPICFGE
ATKFSRYLLDADKAYRTTAKLGVITDSGDSDGNVLETRPVSEFQREELLKVINRFIGDVE
QVPPMYSALKHNGKPLYEYARAGVEIERKIRTIKIFKIELLDVRDGEFDLEVYCSKGTYI
RTLVEDIGEILGCGAHVSMLRRIEAGPFPLDRTVTISQLEALQERDGAAALDPFLLPIDI
MLDGFDQICLNSEQSGSILQGQAVRIAHSLKSGLIRLYSNDEEQGERFLGMAEIMDDGEI
APRRLVNFESSD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttgggtcgtaggaaaaaaggccgtaagatcagtggcgttcttcttttagataaacccact
ggtattacttctaataaagcgcttcagaaagtccgctggctgtttgatgctaacaaagca
ggccataccggaaatcttgatccgctagccaccggcgttctgccgatctgctttggcgaa
gccactaaattttctcgttatctgctcgatgcagacaaagcgtatcgcaccactgctaag
ctaggcgttatcactgatagcggcgatagtgacggcaacgttctcgaaaccagacccgtg
agtgagtttcagcgtgaagaattgctgaaagtcatcaatcgctttataggtgatgttgaa
caagtcccccccatgtattctgctctcaagcataatggtaaaccattatatgagtatgcg
cgtgcgggtgtcgaaatcgaacgtaaaatccgaacgatcaaaatcttcaaaattgaatta
cttgatgtaagagatggcgagtttgatctagaggtttactgtagtaaaggcacttatatt
cgaacgctagttgaagatataggtgagatactaggttgtggggctcatgtttcaatgctt
cggcgaatagaagcggggccatttccgcttgatcgtacggttacgattagccaattggaa
gcgcttcaagaacgtgacggagcagccgcgttagatccttttttgttgccgattgatata
atgttagatggatttgatcagatttgtctaaatagtgagcaatctggctcgatattacaa
gggcaagcggttagaatagcgcattctttaaaatctggcttaattcgtctttattctaac
gacgaagagcaaggtgaacgatttcttggcatggccgagataatggacgatggtgaaata
gcaccgcgtcgattagtaaatttcgaatctagtgattag
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