Alkalimarinus alittae: NKI27_03785
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Entry
NKI27_03785 CDS
T08567
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
alkm
Alkalimarinus alittae
Pathway
alkm03030
DNA replication
alkm03430
Mismatch repair
alkm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NKI27_03785
03430 Mismatch repair
NKI27_03785
03440 Homologous recombination
NKI27_03785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alkm03032
]
NKI27_03785
03400 DNA repair and recombination proteins [BR:
alkm03400
]
NKI27_03785
Enzymes [BR:
alkm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NKI27_03785
DNA replication proteins [BR:
alkm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NKI27_03785
DNA repair and recombination proteins [BR:
alkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NKI27_03785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UZE96882
UniProt:
A0ABY6N426
LinkDB
All DBs
Position
860925..862349
Genome browser
AA seq
474 aa
AA seq
DB search
MSDVLNQAFVFIDLETTGGRPPGDRITEIGLKKVVNGQVVDEWQTLVNPEVTIPPFIENY
TGITNEMVQDAPLFSAVADTLKRKLEGAVFVAHNARFDYSFIKSEFRRVNEPFSAKVLCT
VKLSRQLYPQYIKHGMDALIARHDLPAAPRHRAMGDVDSMLAFYVHALSECGNDAVESAI
SKILKRPSLPSNLPADVLDELPQTFGVYRFYGENDVLLYVGKANNIYQRVMAHFSSDHST
AKGVVMTQSIRRIEWTETAGELGALLLELEQIKGLKPIYNKRSRAVDSFYTYTLIPNKQG
YLSLKLVQDVDITRLDSAFGLFKSKKIAEKALQGINAANELCATLLGVDIGLGPCFQYKL
GHCKGACLGEEDVARYNLRMKIAFHSLQLKRWPYNGAVAIKEHVSFIDKTHIHIIYGWIH
LGTVESEEALEDFDVGQYVQACLDGESSFDPDNYRVISNYLTAPKNRLNVIMLD
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtattaaatcaagcgtttgtttttatcgaccttgaaaccacaggggggcga
cctcctggggacagaattacagaaataggccttaaaaaggtggttaatgggcaggtggtt
gatgagtggcagacgcttgttaatcccgaagtaaccatccctccgtttatcgaaaactat
actggaattactaatgagatggtgcaagatgcgccgttgttttccgctgttgctgatacc
cttaaaagaaagcttgagggcgctgtttttgtggctcacaatgctcgatttgattacagc
tttataaagagcgagtttcgtagagttaacgagcctttttctgccaaagtactttgtaca
gttaagctgtctcggcagctttacccgcagtatattaagcacggtatggatgcgctgatc
gctagacatgatctgcctgcggcacccagacatcgtgccatgggcgatgtcgattcgatg
ctagcgttttacgttcatgccttatctgagtgcggaaacgacgccgtcgaaagcgccata
agcaaaatacttaagcgcccgagcctaccttcaaaccttcctgctgacgtgttggatgaa
ctacctcaaacattcggtgtttaccggttttatggtgagaatgatgtgctgctctatgtg
gggaaggcaaacaatatatatcagcgggtaatggcgcatttctcgtctgatcatagcacc
gctaaaggtgttgtaatgacacaaagtataagacgaattgagtggactgaaacggcaggc
gagctcggcgcgctgttgctagaactcgaacaaataaaggggttaaagccgatatataat
aagcgctctagggcagttgatagcttttacacctatacgttgatacctaataaacaaggc
tacttatcacttaagcttgtgcaagacgtcgatatcactcggttagatagcgcttttgga
ctttttaaatccaagaaaattgctgaaaaggcacttcaaggtattaacgcggccaacgag
ctctgtgcaacgttgttgggggtggacatagggctaggcccttgttttcagtataagctg
gggcactgtaaaggcgcttgtcttggtgaggaagatgttgctcggtataacctaagaatg
aagattgcattccattcgctgcaactcaaaagatggccctacaacggggctgttgccatt
aaagagcacgtatcatttatcgataaaacacacattcatattatatatggttggattcat
ctcggaaccgttgagagcgaagaggcgttggaagattttgatgtggggcaatatgtacaa
gcatgtttagacggcgagtcctcatttgatccagacaactatagagtgatcagtaactac
ttaacggcacctaaaaaccgtttgaatgttataatgcttgattaa
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