Alkalimarinus alittae: NKI27_04410
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Entry
NKI27_04410 CDS
T08567
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
alkm
Alkalimarinus alittae
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alkm03016
]
NKI27_04410 (cmoB)
Transfer RNA biogenesis [BR:
alkm03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
NKI27_04410 (cmoB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_31
Methyltransf_12
NpmA
FtsJ
CMAS
PCMT
Luteo_PO
MTS
Motif
Other DBs
NCBI-ProteinID:
UZE97001
LinkDB
All DBs
Position
complement(1007200..1008183)
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AA seq
327 aa
AA seq
DB search
MDFFKIYQDLFQYMKEGRLNRWLDNLIPQLEQRLLDNPHGDLARWQEALGQLPAIKADQV
ALNTPAITASTADKLSVADQAQLKSALMALSPWRKGPFELFDTYINTEWHSDWKWDRVVP
HISSLKNRVVLDVGCGSGYHCWRMLGEGAERVIGIDPNYLFLTQFEAIKKYCGPQSPIHL
LPVKMEEVPANLEAFDTTFSMGILYHRRSPIDHLIELKSTLRKGGELVLETLVIEGDDDQ
CLMPDERYAMMRNVWFIPSCEMLTLWLKRAGFNDIKLVDLNKTTTEEQRGTEWMTYQSLD
SFLDPEDTSKTIEGYPAPLRATFVATK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtggatttttttaagatataccaagatctatttcaatacatgaaagagggccgactgaat
cgctggctggataatttaatcccacagctggaacagcggcttttagacaaccctcatggt
gaccttgcacgatggcaagaggccctaggccaattaccagcgataaaagccgaccaagtg
gctctaaatactcccgctattaccgcaagtaccgccgacaaattatccgttgcagaccaa
gcgcaattaaaatccgctttgatggcccttagcccttggcgaaaagggccttttgagtta
ttcgacacttacattaatacagaatggcattcagattggaaatgggatcgagtggtaccc
catatatcctcccttaaaaacagagtagtgttagatgtaggttgtggctcaggttatcac
tgctggcgaatgctaggcgaaggtgctgaacgcgtcattggcattgatcccaattacctt
tttctaactcagtttgaagccattaagaagtattgcggccctcaaagccctattcactta
ctgccggtaaaaatggaagaagtgccagccaaccttgaagcctttgatacgaccttctca
atggggattttatatcatcgccgctcacctattgaccaccttattgagcttaaaagcacg
ctcagaaaagggggcgaattagtacttgagacattagtgatcgaaggggatgacgatcag
tgtttgatgcctgacgagcgttacgccatgatgaggaatgtctggtttattccaagttgc
gagatgctgacattatggcttaaacgagctggctttaatgacattaaattggtcgatttg
aataaaacaactacagaagagcagagaggaacggagtggatgacatatcaatctctcgac
agttttctggacccagaagacacctctaaaactattgagggctaccctgcaccactaaga
gcgacgtttgttgccactaaataa
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