Alkalimarinus alittae: NKI27_06305
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Entry
NKI27_06305 CDS
T08567
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
alkm
Alkalimarinus alittae
Pathway
alkm00541
Biosynthesis of various nucleotide sugars
alkm01100
Metabolic pathways
alkm01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NKI27_06305 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
alkm01005
]
NKI27_06305 (kdsA)
Enzymes [BR:
alkm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NKI27_06305 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
alkm01005
]
Lipid A
NKI27_06305 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
UZE97359
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All DBs
Position
1393602..1394450
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AA seq
282 aa
AA seq
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MSKVINVQNISVANDRPFVLFGGMNVLESRDMAMQIAEKYVEVTQKLGIPYVFKASFDKA
NRSSIHSYRGPGMEEGLKIFEEIKSTFNVPVITDVHEIYQAAPVADVCDVIQLPAFLARQ
TDLVAAMAKTGAVINVKKPQFLSPSQMGNIVEKFKEAGNENIILCERGSNFGYDNLVVDM
LGFRTMKECTGGLPLIFDVTHALQCRDPSGAASGGRRGQVAELARAGMAAGLAGLFLEAH
PDPDNAKCDGPSALRLDKLEPFLQQIKAIDDLVKSLEPLDTE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagttattaacgttcagaatatatccgttgctaacgatcgcccttttgtatta
tttggcggaatgaatgttttagagtcacgcgatatggcgatgcagatcgctgaaaagtac
gtagaagtgactcagaaattgggtattccctacgtatttaaagcctcattcgataaagcg
aatcgttcctcaatccactcttatcgtggacctggcatggaagaagggctgaagatcttc
gaagagattaagtcgacattcaatgtgcctgttataaccgacgtacatgagatttatcag
gcggcaccagtagcggacgtttgtgatgttatccagctacctgcttttctggctcgccaa
accgacctggtggcagcaatggctaaaaccggcgcggtgattaatgttaaaaagccgcag
ttcctgagcccttctcaaatgggtaatatcgttgagaagttcaaagaagcgggtaacgag
aatattattttatgtgagcgcggcagtaactttggctatgacaacttggttgttgatatg
cttggttttaggaccatgaaagagtgtactggtgggcttccgctgatttttgatgtcact
catgcattgcaatgccgtgacccatccggtgctgcatcgggtggacgcagagggcaagtg
gctgagttagcacgtgcaggtatggcggcaggtttagcaggattattcctagaagcacac
ccagaccctgacaatgctaaatgcgatggcccaagtgcattacgtttagataagttagaa
ccgtttttacagcagattaaagccattgatgatttggttaagagccttgaaccgctagat
actgaatag
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