Alkalimarinus alittae: NKI27_08455
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Entry
NKI27_08455 CDS
T08567
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
alkm
Alkalimarinus alittae
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alkm03009
]
NKI27_08455
Enzymes [BR:
alkm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
NKI27_08455
Ribosome biogenesis [BR:
alkm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NKI27_08455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
AcMNPV_AC11
DUF6494
Motif
Other DBs
NCBI-ProteinID:
UZE97749
LinkDB
All DBs
Position
1860639..1861559
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AA seq
306 aa
AA seq
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MTSDTSNTPSTNTSSSSLAGERLQKLLAQAGVGSRREIEAWIKAGRISLNGETAKLGDRA
VFTDTITLDDKPVKMDRGEMSARRILIYNKPEGEVSTRNDPEGRPTVFDRLPPLKGQRWI
IVGRLDINTSGLLLFTTDGELANRLMHPSNEIDREYAVRIKGDVDDEMIARLKQGVLLED
GMAKFTDIHDSGGTGLNHWFHVVLMEGRNREVRRLWASQGVSVSRLKRVRFGCMFMPSRL
KVGHFEELGQKDADNLCAMVGLKSKPITKKKPKDIEKLKRQSNKKAKPVFEGRRSGKPGA
GGRKKK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgatacatcgaacaccccatcaacaaacacttcttcaagttcgcttgcaggg
gaacggttacaaaaactattggctcaagcgggtgtaggctccagaagagaaatagaagcc
tggattaaagcgggtcgtatctctcttaacggagagacagccaagctaggtgatagagcc
gtattcactgataccattacgctggatgacaagccggttaaaatggatcggggtgaaatg
tctgcccgtagaattcttatttacaataaaccagaaggtgaggtgagtaccagaaacgac
cctgaaggaagacctactgtttttgatcgactgccaccacttaaaggccaacgttggatc
attgtgggtcgattagatattaatacctcgggcctgctactgtttacgacagatggtgag
ttagctaaccgccttatgcatccctctaacgagattgatcgtgaatatgctgtgcgtatt
aaaggtgatgttgatgacgagatgatcgcccgactgaagcaaggtgtattactcgaagat
ggaatggctaaatttacggatattcatgactctggtggtacggggcttaatcattggttt
catgtcgtgcttatggaagggcgaaaccgtgaagtaagacgtttatgggcttcccaaggc
gtatcggttagccgtcttaaacgtgtaagattcggttgtatgtttatgccgtcaagactt
aaagttggacattttgaagagttaggccaaaaagatgcggataacctttgtgcgatggtc
ggtttaaagtcgaagcctattactaagaagaagccaaaagatattgaaaagttaaaaaga
caaagtaataaaaaagcgaagcctgtatttgaaggtaggcgcagcggtaagccaggggca
ggtgggcgcaaaaagaaatag
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