Alkalimarinus alittae: NKI27_08470
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Entry
NKI27_08470 CDS
T08567
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
alkm
Alkalimarinus alittae
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alkm03036
]
NKI27_08470 (smc)
Chromosome and associated proteins [BR:
alkm03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
NKI27_08470 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
SMC_hinge
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UZE97752
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Position
1863682..1867224
Genome browser
AA seq
1180 aa
AA seq
DB search
MRLKSIKLAGFKSFVDPTTVSFPTNLSAVVGPNGCGKSNVIDAVRWVMGESSAKHLRGES
MTDVIFNGSNGRKPVGQASIELVFDNTEGKLVGEFAQFNEISIRRKVTREAQSFYYLNGT
KCRRRDITDLFLGTGLGPRSYAIIEQGMISKLIESKPEELRVFLEEAAGISKYKERRKDT
ERRMKRTEENLDRLADIREELERQLSHLHKQAQAAEKYTELKKEERLKNAQLNALKWRDL
DRKLSEKSTQVQGLELRLEEVLYARTANDTLSEQLRIEHHDSSEKFNKVQALYYESGAEI
ARVEQSLQHQKERAAQLQKELQDVVSSVNELKEELDADQLRLDEIVIEYEELVPELEESN
AQSDESAERLAVMEDEMQRWQHDWEQFNQLSSDARQRAEVEQSRIKQSELSLLRIGDKIT
RLQEELMTLEDQSDQGILEELKEQIAEKDIVVEDARELRLDASDIITASRESINQLEQIL
AENRNKYQQNTGELASKIALQKGALGDDDQERISWFQQQGINTDATLARQLKVSGGWDTA
VEVVLGRFLQGVKVPSLETMAGVETTDLTSSISLFEDTNSESIHATNVTENVKGDRGFEK
KCLSLFVEGRGFYSGILNKIFTAESLTEALSVRQTLLPDESIVLRDGTWIGRHWINLFKQ
GSAASGLLQRQKAIDELTVIVDEQREIISALESELQQHRVSLKDNELKLEEAARQVSEAE
KTQSLLTSQLSSAEVKFEQLFARVIRTKEDLADLTIQKEQELEALEASRIVWQQAMDDMD
KNADEREIQLQRRDDIRASLDNYRQQARHQRDTSHQLQLKVQAAKNQKEGLSTTIYKLTL
QLERVSERHRLLLESAESNSDPLEELQIRLEELLENRLNEETLLNNARETLERVDAQMRD
QERSRIESEQKLNDIRGTLEQERMESQALEIHRTGVEEQLKKDSFDLDAVLNILPEHAEE
RLWKDELAKIANRIQRLGAINLAAIDEYKIQSERKTYLDAQDAELREALETLESAIRKID
RETRARFKETYDKVNNGLQELFPKVFGGGSAYLALTGDDLLETGVSIMARPPGKKNSTIH
LLSGGEKALTAIALIFSIFQLNPAPFCMLDEVDAPLDDANVARYANMVKDMSSKVQFIYI
THNKIAMEMADQLMGVTMHEPGVSRLVSVDVEAAAKLAAV
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagactaaaatcgatcaagcttgcaggttttaaatcatttgtcgaccccaccaccgtg
tcgtttccaaccaatctctctgctgttgttggcccaaatggttgcggcaaatctaatgtg
attgatgcggtaaggtgggtcatgggtgaaagttcagcaaaacacttgcggggcgaatct
atgacagatgttatctttaatggttccaatggacgcaagcctgttggtcaggcatcgatt
gaactagtgttcgataatactgaaggtaaactggtcggagagtttgctcaatttaatgag
atatcgatcagacgaaaagtcacccgagaagcgcaatcattttactatttaaatggtaca
aaatgccgacgacgcgatattactgacctgtttttaggtacaggtttagggcccagaagt
tatgcgatcatagagcaaggaatgatctctaaactcattgagtcgaaaccagaagagctt
agggtttttttagaagaagccgcaggtatatcaaaatataaagaacgaagaaaagacacc
gaacggcgaatgaagcggacggaagaaaacctagaccgccttgccgatattcgcgaagag
ctagaaagacagctatcacacctacacaaacaagctcaggccgcagaaaagtatactgaa
ttaaagaaagaagaaaggcttaaaaatgcacagctcaatgcacttaaatggcgtgaccta
gatcgaaaactgagtgaaaaatcaactcaagtgcaagggttagagcttcggctagaagaa
gtgttatatgcgcgtaccgcgaacgatacactatcagagcaattgcgcatcgagcatcat
gattctagcgaaaagtttaacaaagtacaggctctttattacgagtcgggcgcagaaatt
gctcgggttgagcaaagccttcagcaccaaaaagagcgagcagcacagttacaaaaagaa
ctccaagacgtggtgtcgtcagttaatgaacttaaagaagagttagatgccgatcaattg
cgtctcgatgagattgtgattgagtatgaagagcttgttccagaattagaagaaagtaac
gcgcagtcagacgagtcagcagaaaggctggcggtcatggaagatgaaatgcagcgttgg
cagcatgactgggagcagtttaatcaattatcgtctgacgcacgtcagcgcgctgaagta
gagcagtcaagaataaaacaaagtgaactgtcattgttgcgtatcggagataaaataaca
cgattgcaagaagagttgatgacgctagaagatcagagtgatcaggggattcttgaagag
ctaaaagaacaaattgcagaaaaagatatcgtagtcgaggatgcccgagagctaaggtta
gacgcgtctgacatcattacagcgagtcgcgaatcaattaatcagctagagcagatactg
gccgaaaatcgcaataaataccaacagaataccggtgaattagcctcaaaaatagcgctt
caaaaaggcgctcttggtgatgatgatcaagagcgaatcagctggtttcagcagcaaggt
attaatacagatgcgacacttgctcgacaactgaaagtgagcggcggctgggatactgct
gtagaggtggtcttagggcgctttcttcaaggggttaaggttccctctttggagaccatg
gcaggtgtagaaaccactgatttgactagctcaatatcgttgtttgaagatactaattct
gagtctatccacgcgactaacgttaccgaaaacgttaaaggcgatcgtggtttcgagaaa
aaatgtctttctttatttgtagaagggcgcggtttttattctggcatccttaataaaatt
tttacggctgagagcttgaccgaagccttgtctgttcgacagacgttattacccgatgaa
tcaatcgtattgcgcgatggtacgtggataggacggcactggattaacttatttaagcaa
ggctcagccgcaagtggtttgttacagcgccaaaaagctatcgatgaattaaccgtgatc
gttgatgagcagcgtgaaataatttcagcgcttgagagcgagcttcaacagcaccgagtg
agcttaaaagataatgaattaaagcttgaagaggcggcaaggcaagtgtcggaggcagaa
aaaacgcagtcattattgacctctcaattaagctcagctgaagtaaagtttgagcagctt
tttgcccgagtgatcagaacaaaagaagatcttgcagacctcacaattcagaaagagcaa
gaactggaggcactcgaagcgtcaagaatcgtttggcagcaggccatggatgatatggat
aagaatgctgacgagcgtgaaattcaattgcagcggcgtgatgatattcgggcatcctta
gataactatcgacagcaggctcgacaccagcgtgatacctcgcatcaattacaactaaaa
gtacaagcggcaaaaaatcaaaaagaaggtttatcaaccaccatatataagctcacactg
cagttagagcgtgttagtgagcgacatcgcttactgctagaaagcgctgaatcaaactct
gaccctttagaagagcttcaaatcagattagaagaattacttgaaaataggctgaatgaa
gaaacgttgcttaataatgcacgagaaaccttagaacgtgttgacgctcaaatgagagat
caagagcgatctcgaattgaatctgaacaaaaactcaatgatataaggggaacgttagag
caagagcgaatggaatctcaagcgcttgagattcatcgtacaggtgttgaagagcagctt
aaaaaagatagctttgatcttgacgctgtattgaatattttacctgagcatgccgaagag
cggttatggaaggatgagctagcaaaaattgcaaatcgtattcagcgtctaggtgcgatt
aacctagccgctattgatgaatataaaattcaaagtgaacgtaaaacctatctagacgcc
caagatgcagaattaagagaggcgctagaaacacttgagtctgctatccgtaaaattgac
cgtgaaacccgagcaaggtttaaagagacttacgataaagtcaataacgggctccaggag
ttgttccctaaggtctttggtggtggtagtgcttatcttgcgctcacaggggacgacctg
ttagaaacaggcgtttcgattatggcgcgccctccaggtaagaaaaactcaaccatccat
cttctttcaggtggcgaaaaagcattaaccgctattgcgttaatattctctatttttcaa
ttaaaccccgcaccgttttgcatgctagatgaagtagatgctccgctagatgatgcaaac
gtggctcgttacgcgaatatggtgaaagatatgtctagtaaagtgcagtttatttatatc
acccataataaaatcgcgatggaaatggctgatcagttaatgggtgttacgatgcatgaa
cccggtgtatcaaggcttgtgtctgttgatgtagaagcagctgctaaacttgctgcggta
tga
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