Alkalimarinus alittae: NKI27_08680
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Entry
NKI27_08680 CDS
T08567
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
alkm
Alkalimarinus alittae
Pathway
alkm03030
DNA replication
alkm03430
Mismatch repair
alkm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NKI27_08680 (dnaX)
03430 Mismatch repair
NKI27_08680 (dnaX)
03440 Homologous recombination
NKI27_08680 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alkm03032
]
NKI27_08680 (dnaX)
03400 DNA repair and recombination proteins [BR:
alkm03400
]
NKI27_08680 (dnaX)
Enzymes [BR:
alkm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NKI27_08680 (dnaX)
DNA replication proteins [BR:
alkm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NKI27_08680 (dnaX)
DNA repair and recombination proteins [BR:
alkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NKI27_08680 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_30
ResIII
AAA_18
AAA_16
AAA_14
AAA_19
AAA_2
PIF1
AAA_assoc_2
SKI
TsaE
nSTAND3
Rad17
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
UZE97791
LinkDB
All DBs
Position
1909407..1911572
Genome browser
AA seq
721 aa
AA seq
DB search
MSYQVLARKWRPQSFKEMVGQEHVLKALINSLDQQRLHHAYLFTGTRGVGKTTIGRILAK
CLNCETGITSVPCGQCGACREIAEGRFVDLIEIDAASRTKVEDMRELLDNVQYSPTRGRF
KVYLIDEVHMLSSSSFNALLKTLEEPPEHVKFLFATTDPQKLPVTILSRCLQFNLKNMPP
ERIVGHLKNVLGQEQIDFEDSALWLLARSADGSMRDALSLTDQAIAYGNHTLAERDVSAM
LGSIDQKQVYRIIEAVANSNAASVLQEVSALAEFSPDYSAVLANVISVLHRVAVEQVVPG
STDNSMGDQVQIAELAKALTAEDVQLFYQVALVGRSDLPISPDQRAGLEMVLLRMLAFQP
NIDCNIPKVKLSNHDSPVNSPSIQEKPESDVASTDSELANQGSDLTSTNEQASKPSVSDV
QDASVNQGATEASANIESNTVEGATEEQAALEQAPLEQAQTVASEPAYSESSLVESAPSH
VEEASLDNASQPPEGHPASDEFVGEGSYEDSTYEDSTYAGGDYDDNGLDDHYLQSQSSDG
LTQKKTAELQVAPSQQASTSPEPEPGVSQQDTIAASVSAAIEELAPESNDINAFLPMDNP
WPHILPLLKLTGMTQNLAANTSLILEQNRAELCAAEGNYKLLTDTHKSRIISAFKSLFGD
NFNVDFSLGRTEVETPAEWKDRKKEERLALAISSIETDPNVVTLVNKFDATILTSTVEPL
D
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttctcgcaagaaagtggcgcccccagagctttaaagagatggtgggg
caagagcatgttcttaaggcgttaataaattcgcttgaccaacaaagactacaccatgct
tatttatttactggcacccgcggtgttggtaaaacgaccattgggcgtatcttagctaag
tgtcttaattgcgagaccggaatcacgtctgtcccttgtggtcagtgtggtgcctgcaga
gaaattgccgagggccgatttgtcgatctaattgaaatcgatgcagcctctcgtaccaag
gttgaagatatgcgtgagttgctggataacgtccagtactctccaacaagagggcggttt
aaggtatatctgattgatgaagtccacatgctttcatcatccagttttaatgcattactt
aaaacacttgaagagccgcctgagcatgtaaaattcctttttgctaccactgacccgcaa
aagcttcctgttactattttatctcgatgccttcaatttaatttgaagaatatgccacct
gaaagaattgtaggccaccttaaaaatgttctagggcaggagcaaattgactttgaggat
agtgcgctttggctcttagctcgatcagccgatggcagtatgcgagatgcattaagtctt
acggaccaagcgattgcttacggtaaccatacacttgctgaacgcgatgttagcgcgatg
ttggggtcgatagatcaaaagcaggtatatcgaatcattgaggcggtagcaaactcgaat
gcggcgagtgtattgcaggaagtctcagcgcttgctgagttttctcctgactatagtgcg
gtgttagctaatgttatttctgttttacatcgagtcgcagttgagcaagtcgtgccgggt
agtaccgataactctatgggcgatcaggtgcaaattgccgagctggcaaaggcattgacg
gctgaagacgtacagcttttttatcaagttgcgctagtagggcgtagcgacttacctata
tcgcctgatcagcgagcgggactagaaatggttttgctaagaatgttggcctttcagccc
aatattgactgtaatattccaaaagttaagcttagcaatcatgactctccagttaatagc
ccctctatacaggaaaaacctgaatcagatgttgccagtactgactcagaactcgctaat
caaggttcagacctcacttcaacaaacgaacaggctagcaagccaagtgtttctgacgtg
caagacgcatctgtcaatcagggggcgactgaagcgtctgctaatatagagtcaaataca
gtagagggcgcgaccgaagaacaagcagcgttagagcaggcacctctagaacaagcacag
acagtcgctagtgaaccagcgtattcagagtcatcgcttgtagagtcagcaccttcccac
gtcgaagaagcctcgttagacaatgcctctcagccgcctgaagggcaccccgcgtctgat
gagtttgttggtgagggctcatatgaagatagcacttatgaagatagcacttatgcgggt
ggcgactatgacgataatggcttagatgatcattatttgcagtcgcagtctagcgacggg
ttaactcaaaaaaaaacagcggaacttcaagtagcccctagccagcaggcttcaacgtcg
cctgagccagaaccaggcgtaagccagcaagacactattgcggcctctgtgtctgctgct
atcgaagagttagcccctgaatcaaacgatatcaatgcttttttgccgatggataaccct
tggccacatatattgccgttgcttaaattaaccggtatgacacaaaatttagcggctaat
accagtttgatcctagagcaaaatagggcggagctatgtgctgcagagggtaactataag
ctactgaccgatacacataagtcacgaattatctcagcatttaagtcgttgtttggcgat
aattttaacgtcgatttttcgttaggccgtacagaggttgaaacacccgcagaatggaaa
gataggaagaaagaagagcgtttagcgctggcgatttcttcaattgagacagatccaaac
gtggtcactcttgtaaataagtttgatgcaaccatattaacatcaacggtagagccttta
gattaa
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