Alkalimarinus alittae: NKI27_11275
Help
Entry
NKI27_11275 CDS
T08567
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
alkm
Alkalimarinus alittae
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alkm03032
]
NKI27_11275 (hupB)
03036 Chromosome and associated proteins [BR:
alkm03036
]
NKI27_11275 (hupB)
03400 DNA repair and recombination proteins [BR:
alkm03400
]
NKI27_11275 (hupB)
DNA replication proteins [BR:
alkm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NKI27_11275 (hupB)
Chromosome and associated proteins [BR:
alkm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NKI27_11275 (hupB)
DNA repair and recombination proteins [BR:
alkm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NKI27_11275 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
Barstar
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
UZE94667
LinkDB
All DBs
Position
complement(2479462..2479734)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADISKAAAGRALDAMTDSVTTALKGGDQVTLIGFGTFSVKDRAARTG
RNPQTGAEIQIAAAKVPSFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctgaacttattgacgcaattgctgcatcagcagatatttctaaagcagct
gcaggtcgtgcattggatgcaatgactgattctgttactactgcacttaagggtggggat
caggttactcttattggttttggaactttttctgtcaaggatcgagcagcgcgtactggt
cgtaacccacagacaggtgcagagattcaaattgcagctgcaaaagtaccaagctttaaa
gcgggtaaagcgttaaaggatgcagtaaactaa
DBGET
integrated database retrieval system
