KEGG   Alkalimarinus alittae: NKI27_13625
Entry
NKI27_13625       CDS       T08567                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
alkm  Alkalimarinus alittae
Pathway
alkm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:alkm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NKI27_13625 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:alkm02044]
    NKI27_13625 (tssH)
Secretion system [BR:alkm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NKI27_13625 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 nSTAND3 NACHT AAA_7 Sigma54_activat IstB_IS21 TniB AAA_24 SLFN-g3_helicase Clp_N GhoS NBD_SMAX1
Other DBs
NCBI-ProteinID: UZE95101
LinkDB
Position
complement(3008223..3010853)
AA seq 876 aa
MELAKLIETLNTETKQAVERSAFACIERKGIEITLEDLLLALLDEQTELTHVLAQFDIDI
DRFRAALHFELDTRTTVSSKPVFSDSLLHTLKNAWLLSSLELSLPFISAGSIVLALLNDQ
LRYGRRRYIEMLSVVSFDQLKVLIQGRYAGDSLQESGDTSKEGLCTAPPQQDKSVMGEGI
LSKVTTSLTDLARNSALDPVIGRDTEIRQAIDILCRRRKNNPILLGEAGVGKTAIVEGLA
QKIVDGKVPQALKDVDLRLLDIAALQAGASVKGEFERRITALIEAIQTSLSPIVLFIDEA
HLMVGAGANEGGGDVANLIKPALARGALRTIAATTLVEYKRYIEKDPALVRRFQSVKVAE
PSVEETVTLLRGLRERYAAQHGVYIRDDALISAASLSSRYLTGRQLPDKAIDLIDTACAS
VKVGLAGKPASVELLEQKIETVKRKIEAIERDALNDGYDSQDKHSQLKTHYETVDSLKLQ
LVATESIWQQERDMVNSILICRDGKADKQNERRGQPDAQIMRELREDLTHIQGESPLVHY
EVSAQQVSEVLAAWTGIPAGKMLMDEAQKLGELSTQLETRVKGQGDATTRIGELLCQARV
GLNDPNKPLGVFLLVGPSGVGKTETALTIADTLFGGEKYLTTINMSEFQEKHTISRLIGS
PPGYVGYGEGGVLTEAVRQKPFSVVLLDEVEKADPNVLNIFYQVFDKGVMNDGEGRLIDF
RNTVVVLTSNLASDQIETLCSSDTDSTSDIDSEVLLEKIRPTLNDFFKPALLARMEVLTY
RPLEQCTLRLLVESKLEQLVKRLRTHGTELTITGSVLDAITNRCVLVEAGARHIDRLINQ
HITSKLSKLILFSVAQQTELSEIYLSYEEGVFTVSG
NT seq 2631 nt   +upstreamnt  +downstreamnt
atggaattggcaaaactaatagaaacactgaatacagaaaccaaacaagccgtagaaaga
tctgcgtttgcttgcattgaacgaaaaggcattgaaattacgctagaagatttgttgctc
gcactgttagatgaacagaccgagctgacccacgtgttggctcagtttgatattgacata
gacaggttcagagcggctttacactttgaactagacactcgtactacggtttcatcaaag
ccggttttttctgattcactactacacacgcttaaaaatgcttggctattgagttccctt
gaattatcgctgcctttcattagtgccggcagtattgtgcttgcgttgcttaatgatcaa
ttaaggtatggtcgtagacgctatattgagatgctgagtgttgtttcatttgatcagtta
aaggtgttgattcaagggcggtatgctggtgatagcctgcaggagtcaggagacacaagc
aaagagggattatgtactgcgcctcctcaacaagacaaatccgttatgggcgaaggtatt
ttaagtaaagtgacgactagccttaccgacttagcccgcaactcagcgctagaccctgtt
attggacgcgatacagaaatacgtcaggccattgatattctatgtcgacgcagaaaaaat
aacccgattctattaggggaagcaggcgtaggtaagacggcgattgtagaggggttggct
caaaaaatagtcgacggaaaagtccctcaagcactaaaggatgttgatctgagattgctc
gacatagccgcgttgcaagcgggcgctagtgtaaaaggtgagtttgaacgccgaatcaca
gcgctaattgaggcaattcaaacttcattgagccccattgttttatttatagacgaagcg
catcttatggtgggggcgggcgctaatgaaggcggtggcgatgtggccaacctgataaaa
ccggcactcgccagaggggcgcttcgtacaattgcggcgaccacgctggtggagtataaa
cgctatatagagaaggacccggcattagtcaggcgttttcagtcagttaaggtcgctgag
ccgagcgtagaagagactgtcaccttactgcgggggctgagggagcgttatgccgctcaa
catggtgtctatatccgcgatgatgcgctgatttcagcggcatctctttcttcacgctat
ttaacaggcagacagctaccggataaagccatcgatttaatcgataccgcgtgcgcaagc
gtgaaagtagggctggcaggtaagcctgcttctgtcgaactactggaacaaaagatagaa
acggtaaagcgtaaaatagaggccatagaaagagacgctctgaatgatgggtatgacagc
caagataaacatagtcagctaaaaactcactacgaaacagttgattcactcaagctgcag
ttggttgcaactgagtctatctggcaacaagaacgagacatggtcaattcgattcttatc
tgccgtgacggcaaggctgataaacagaacgaaagacgaggtcaaccagatgctcaaata
atgagggagcttagggaggatttgactcatattcagggtgaatcaccgctggttcattat
gaagtatctgcgcaacaagtaagtgaggttttagccgcttggacaggtattccggcaggt
aaaatgctgatggatgaagcccaaaagttaggtgagttatcgactcagctagaaacaaga
gtaaaagggcagggcgatgcaacgacacggattggcgaactactttgtcaagctagagta
ggcttgaatgacccgaataagccgcttggtgtattcctattagttggccctagtggtgtc
ggaaaaacagaaacagcgctaaccattgcagatacattgtttggtggtgaaaaatatctg
accactatcaatatgtcagagtttcaggaaaagcataccatttctcgactaattggttcg
ccaccaggttatgtagggtatggtgagggaggcgtgctgactgaggcggtacggcaaaaa
cctttttctgttgtgttgttggatgaagttgaaaaagctgatcctaatgtactgaatatt
ttttatcaggtgtttgataagggcgtgatgaatgacggcgaaggtaggctgattgatttt
cgaaatacggtagtggtcttaacgagtaacctagcgtctgaccaaattgagacgctgtgt
tcttctgacactgatagcacttcagatatcgactctgaagtattgttagaaaaaataaga
cctacattaaatgacttctttaaacctgcgcttttagctcgtatggaggtattaacgtat
cgtccacttgagcaatgcacgttgagattgttggtggaaagtaaactcgaacagctggtt
aagcggttgcggacacacggtactgaattaactattacaggttcggtattggatgcgata
acgaatcggtgtgttttggttgaagcgggtgcgaggcatatcgatagactgattaatcag
catataacctctaaattgtctaagttgattttattttcggtggcacagcagactgagttg
agtgaaatctatttaagttatgaggaaggcgtgtttaccgtgtcgggataa

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