Alkalimarinus alittae: NKI27_14965
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Entry
NKI27_14965 CDS
T08567
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
alkm
Alkalimarinus alittae
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alkm03400
]
NKI27_14965
DNA repair and recombination proteins [BR:
alkm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NKI27_14965
Archaeal homologous recombinant proteins
NKI27_14965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_16
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UZE95355
LinkDB
All DBs
Position
3312879..3315938
Genome browser
AA seq
1019 aa
AA seq
DB search
MRPNKLLIQAFGPFAKKEEIDFTSLGDNPLFLINGPTGAGKSSILDAICFALYGQTTGKE
RDPSHMRCDHAAPDLLTEITLDFSLGEQHYRVRRAPTQERPKSRGEGTTPHQTEAQIWQL
KPEGDQLLVPQKAQEATQTIEALTGLNVEQFRQVMVLPQGKFRDFLMADSSQREAIFSKL
FQTQIYKRIEDTLKTKAASIRKEVENLQNQIKGILQGADLNTEAEVQEQLTALTPQLESA
TQHKNQTVEALAKAEKALEAGKILTKAFLALDTTQKALDNLNAKKVHIDAQKHLLTRAQT
AQKIEHLKATLSKSILTQAQLDKDIKTTEQNLSQHQNALAQAQSVLDQAEKNNQSLDVLK
EQLADLRKLEPKINQLAEAIKQSQTTQTALETASAAFENQQTQLKQLITRISASENRINT
LKAASAVLPEKQRQLDGLLILGQQRANLDKRFEEQKALQQTRIIREEHLNTCRAKFDAQV
NQVKQLEFTWHSSQAAILAAELKQGQPCPVCGSQEHPTPANTLGQASPVTKQGIEAARAI
QTTLQQQLTSAQNDVTQTSTQQQNIEALIIEQQQELGENQHHPTHQLRADWRKLNDEVET
FQLQQKEQTQLEMELQALTLQRSQLEQQIEVARLSLQKAQQEQTIAAQNQLHIQQALPEE
YRVTGTLTHQIEQLDAQIKSITMTYDHALATFNANQEKVTQSQVISEQQQIQKKAIDQAL
AEAHKNWTTALSQSAFKDEDDFINAQKTESEQQQLLSEIEQYSHQLSGCKATLEQQQQQL
DQQKTPNMEALEAEKSQLKATSAQSLESWKNIDNRHRQLTDVLIKLDQAHQSNHALESEY
KVYGTLSDVANGQTGNKISLQRFVLSVLLDDVLIEASHRLNNMSKGRYLLIRKEERAKGN
KASGLELEVEDAYTGKTRSVATLSGGESFMAALSLALGLSDVVQAYAGGIKLETLFIDEG
FGSLDQESLDLAIKTLIDLQSSGRMIGIISHVSELRDQMALRIDVHSSASGSHIFVKGE
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgaataaactactcattcaagcctttggccctttcgctaaaaaagaagagatt
gactttacgagcttgggcgacaacccgctttttttgatcaatgggccaacaggcgcggga
aaaagctccattctcgatgcgatctgctttgctttgtatggccaaacaacagggaaagag
cgcgacccttcgcatatgcgctgtgaccatgccgcacccgacctgcttacagagataacc
ttagacttttcactcggcgagcaacactaccgagtgcgtcgtgcgccgacacaagagcgc
ccaaaatctagaggcgaagggaccaccccccaccaaacagaagcacaaatatggcaatta
aagcctgagggcgaccagcttttagtcccgcaaaaagcacaagaagccacccaaaccata
gaagcactaaccggccttaacgtagaacaattcagacaagtcatggtgctcccacaaggg
aagttcagagacttcttaatggcagactcaagccaacgagaagcaatattcagtaagctt
tttcaaacccaaatttataagcgcattgaagacacccttaaaaccaaggccgcctccata
cgtaaagaggtagaaaacctacaaaaccaaattaaaggcatacttcaaggggcagaccta
aatactgaagcagaagttcaagaacaacttactgcgcttacaccacaattggaatctgcg
acacaacataaaaatcagaccgttgaggcgctcgcgaaagcagaaaaagcattagaggcg
ggaaagatactgaccaaagcctttttagcgctagatactactcaaaaagcccttgataac
ctcaacgccaaaaaagtccacatagatgctcaaaagcacctattgacccgtgctcagacg
gcacaaaaaattgagcacttaaaagcgacactgagcaaatcaattctaacccaggcgcag
ttagacaaagacataaaaacaactgaacaaaatctgagtcagcaccaaaacgcattagct
caagcccagtctgtactcgatcaagcagagaaaaataaccagtctctcgatgtattaaaa
gaacagcttgccgacttacgtaagctagagcctaaaattaaccagctagccgaagcaata
aaacaaagccaaacaacacaaacggcacttgagactgccagcgctgcgtttgagaaccag
caaacacagctaaaacaactcattacccgcattagtgcttctgaaaatcgcatcaacacc
ttaaaggcagcttctgcggttttacctgaaaaacaacgtcaattagatggtctgctgata
ttaggtcagcaacgcgctaatttagataaacgatttgaagaacaaaaagcacttcagcaa
acgcgtatcatacgagaagaacaccttaacacctgcagagccaagtttgacgctcaagtc
aatcaggttaaacagttagaatttacatggcacagtagccaagccgctattttggcggct
gagttaaaacaggggcagccctgccctgtctgcggtagccaagaacaccccacaccggcc
aacacgcttggtcaagcaagccctgtcaccaagcaagggattgaagccgcaagagctatt
caaacaacactacaacaacaattaaccagcgcccaaaacgacgttacacaaacatcaaca
cagcaacaaaatatcgaagccttaattattgaacagcaacaagagctaggtgaaaaccag
catcacccgacgcatcaacttcgtgctgactggcgaaagctcaacgacgaagtcgaaacg
tttcagttgcaacaaaaagaacaaacccaacttgaaatggaacttcaagccttaacatta
cagcgatcacaattagagcaacagatcgaagtagccagactatctttacagaaagcacag
caagagcagaccatagcagcacaaaatcaactgcatattcaacaagcgcttcctgaagag
tacagagtgacaggaacgctgacgcatcaaatagagcaattagatgcgcagattaagtca
attactatgacctatgaccacgcattagcaacctttaatgccaatcaagaaaaagtcacg
cagtcacaggtaatcagcgaacaacagcaaatacagaaaaaagcaattgaccaagcactg
gctgaagcacataaaaactggacaacagcactcagtcaaagcgcatttaaagacgaagat
gattttattaatgcacaaaaaactgaatctgagcaacaacaattattaagtgaaatagaa
cagtacagccatcaactcagtggttgcaaagccacattggagcagcaacaacagcaacta
gatcaacaaaaaacgcccaacatggaagcgctagaagccgagaaaagtcaacttaaagca
acctcagcgcaatcgctagaaagctggaagaatatagataaccgtcaccgtcaactcact
gacgtgctgattaaattagatcaggcgcatcaatctaaccatgcattagaatccgagtat
aaggtttacggcacactcagcgatgttgctaacggtcaaacaggcaacaagatcagctta
cagcgttttgttttaagcgtgctgttagatgacgttctcattgaggcttcccacaggctc
aataacatgagcaagggtcgatacttattaatacgaaaagaagagcgggcaaaaggcaat
aaagcgtctggattagagctagaagttgaagacgcctacaccggcaaaacaaggtcagtg
gccacgctctcggggggcgaatcatttatggcggcgctttcccttgctttaggtctttct
gatgttgtacaagcctatgcaggcggaattaaactagaaacgctatttattgatgaaggg
tttggcagcctagatcaagagtctctcgacctcgcgataaaaacgctaattgaccttcaa
agtagtggcaggatgattggtattatttctcacgttagtgaattacgtgaccagatggct
ctacgtatagacgtacacagctccgctagtgggagtcacatctttgtaaaaggagaataa
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