Alkalimarinus alittae: NKI27_15845
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Entry
NKI27_15845 CDS
T08567
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
alkm
Alkalimarinus alittae
Pathway
alkm00550
Peptidoglycan biosynthesis
alkm01100
Metabolic pathways
alkm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NKI27_15845 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NKI27_15845 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
alkm01011
]
NKI27_15845 (mrdA)
Enzymes [BR:
alkm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NKI27_15845 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
alkm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NKI27_15845 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UZE95522
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All DBs
Position
complement(3514815..3516716)
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AA seq
633 aa
AA seq
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MLFIILLAAVLVSRVYYLQVVDYDHYTTLSDKNRMQLQSVAPTRGLIYDRNGILLADNQP
VFSVSIVKERVDDLEQTIAKIGNIIELSDDQIKNFDRRLKNRRKPYDPVPLKSKLTESEI
ARLAVQRHLLPGVEVEAELVRNYPYGELMAHMLGYVGRINIKELKNVDATNYSATNYIGK
LGIEKFYENVLHGKVGRQTVETNARGRVLRVLDQVPPLPGRDITLSIDLRLQQVVAEAMG
DYRGAVVAIEPATGDILALVSTPSFDPNLFVTGIDHKSYAALRDSLDIPLFNRALKGQYP
PGSTIKPIIGLAGLDTAVVSRQTKIQDPGWYQLKNDERFYRDWKRYGHGVVDLYDSIVQS
CDTFFYSMAFKLGVDRMSLYLDKFGIGSRTAIDINEDRKGILPSRAWKRGTKGLPWFPGD
SLNMGIGQGFMLATPLQLATATAVLANRGRWHRPHLAQKISEGISQDESVEIPRMHETDP
PDVILNNPEDWDYILGSMKSVMHGKKGTARATGRNSAYKMAGKTGTAQVVGIKQGELYDA
EALAERHRDHALFVGFAPYEAPEIALAIIVENGGGGSSTAAPVARKIFDAWILDLPKAEQ
EKETSSRIKYETFPSHNNVDPVSVSVERRHNHG
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttattatattactggctgcagtactggtgtctcgagtttactatcttcaagtg
gttgattatgaccattacaccacgttatctgacaaaaatagaatgcagctccagtctgta
gcgccgaccagagggctgatttatgaccgaaatggtattttgttagcagataaccagccg
gtctttagtgtctcgattgttaaggagcgtgtagacgaccttgagcaaacaattgcaaaa
atcgggaacatcattgagctttcagatgatcagataaaaaacttcgatagacgtttgaag
aaccgccgtaagccttatgatcctgttccgctaaagtcaaaattaaccgaaagcgaaatt
gctaggcttgctgttcaacgccaccttttaccaggcgttgaagttgaggcagagttggtt
cgaaactatccttatggcgagctcatggcccatatgctgggctatgtcgggcgcattaat
attaaagaactcaaaaatgttgatgcgaccaattattcggcgactaactatattggtaag
ttgggcatcgaaaagttttatgaaaacgttctgcacggtaaagtggggcgtcaaacagtt
gaaacgaatgctcggggccgagtattaagagtactcgaccaagtgccccctttgccaggt
cgagatattacactcagtatagacctccgcttacagcaagttgtggctgaggcaatgggc
gactaccgtggcgctgttgttgctatagaacctgctacaggcgacattcttgcgttggtg
agtacgcctagctttgatcctaatttgtttgtaacaggtattgaccataaatcctacgca
gcgttgcgtgactcccttgatataccactttttaaccgggcgcttaaaggtcagtatccg
cctggttcaactataaaaccaattattggtttggcgggtttagatactgccgtggttagt
aggcaaaccaaaattcaagatccgggttggtatcagctaaagaatgatgagcgtttttac
cgtgactggaaaaggtacgggcatggcgttgtcgacctttatgattctattgtccagtct
tgcgatacgtttttttatagtatggcgtttaagttgggcgtagatcgaatgtcactttat
ttagataaatttggtattggtagccgaacagcgattgatatcaatgaagatcgaaaaggc
attttacccagtagggcatggaaaagaggcactaaaggtttaccttggtttcctggtgat
tctttgaatatggggattggacaagggtttatgctagctacaccgctacagttagcgaca
gcaacggctgtattggccaatcgagggcgctggcatagaccgcaccttgctcagaaaata
tcagaaggcattagtcaggatgagtccgttgaaataccgcgtatgcacgaaaccgatccg
cctgatgtaattttaaacaacccagaagactgggattatattttaggctcgatgaaatcg
gttatgcatggtaaaaaagggaccgctagagcgaccggtcgtaactcggcatataaaatg
gcaggtaaaacaggtacggctcaagtggtcggtataaaacaaggggagctctacgacgca
gaagcattagctgagcggcatcgagatcatgctctttttgttggttttgcaccttatgaa
gcccctgaaattgctttggctatcattgtcgaaaatggtggtggaggaagcagtactgcg
gcgcccgtcgcacgtaaaatatttgatgcttggatattggacttacctaaagccgagcaa
gaaaaagaaacatccagtcgtatcaagtatgaaacatttcctagtcataataacgtagac
cccgtgtcggtctcggtggagcgtaggcataaccatggctag
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