Alkalimarinus alittae: NKI27_16255
Help
Entry
NKI27_16255 CDS
T08567
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
alkm
Alkalimarinus alittae
Pathway
alkm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NKI27_16255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
alkm02022
]
NKI27_16255
02035 Bacterial motility proteins [BR:
alkm02035
]
NKI27_16255
Two-component system [BR:
alkm02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
NKI27_16255
Bacterial motility proteins [BR:
alkm02035
]
Pilus system
Twitching motility proteins
NKI27_16255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_16
HTH_30
HTH_50
AAA_5
Pre_tape_measure
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UZE95597
UniProt:
A0ABY6N0Q4
LinkDB
All DBs
Position
3608194..3609555
Genome browser
AA seq
453 aa
AA seq
DB search
MTIKTALIVDDEPDIRELLEITLMRMGIDTCSAENITKAKALLETQEFNLCLTDMNLPDG
NGIDLVCHIQQYFPQIPVAVITAYGSVETAITSLKSGAFDFVSKPVDLARLRELVSSALK
LTEEKKVSKEAVETGNLLLGESPEMERLRKQIRKLARSQAPVYISGESGSGKELVARMMH
LQGPRSEAPFVPVNCGAIPSELMESEFFGHKKGSFSGAVENKEGLFQAANGGTLFLDEVA
DLPIGMQVKLLRAIQEKAVRPVGEQKEVSVDVRILSATHKNLAELVETGEFRQDLYYRIN
VIELDVPKLRERKSDIPLLANHILQRIAEECDIFDAKISDDAMSSLKEYHFPGNVRELEN
IIERAFTLCENDVIETSDLQLRPASKPDGAMEFSENSVQRSEDTSLEDFLEGIERKTIEQ
ALEETRWNKTAAAKKLGITFRALRYRLKKLDME
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaccattaaaacagcccttattgttgatgacgaaccggacattagagaattgttagag
attactctaatgagaatgggaatagatacttgtagcgcagagaatataaccaaggcgaag
gcattgttagagactcaagagtttaacctctgccttacagatatgaacctacctgatggc
aacggcattgatctggtttgtcatatacagcagtacttccctcaaattccggtagctgtc
attaccgcttacggcagcgtagaaacagccattacttcactaaaatctggggcatttgat
tttgtatcaaaaccagtcgacctagccagactacgtgaacttgtcagttcagcacttaaa
ctaaccgaagagaaaaaagtaagtaaagaagctgtagaaacaggaaaccttttgctaggc
gaatcaccagaaatggagcgcctacgaaagcaaattcgcaaactagcacgcagccaagca
ccggtttatatcagcggggaatcaggcagcggaaaagaactcgttgcacgaatgatgcac
cttcagggacctcgatcagaagcaccgtttgtaccggtaaactgcggagccattccaagc
gagctaatggagagtgagtttttcggtcacaaaaaaggcagttttagtggggcagtagag
aacaaagaagggctatttcaggctgccaatggtggaaccttgtttctagatgaggtcgcc
gaccttcccataggtatgcaagtcaagttactcagagccatacaagaaaaagccgtgcgc
ccagttggggagcaaaaagaagtctctgtggatgttcgcattcttagcgccactcacaaa
aacttggcagaactggttgaaactggagagtttcgacaagacctttactaccgaatcaat
gtcatcgagttggatgtgcctaagcttcgagagcgtaagagcgatatccccttgcttgca
aaccacatattgcagcgcatagccgaagagtgtgatatctttgatgccaaaataagtgat
gacgccatgagtagccttaaagagtatcactttcctggcaatgtgcgagaactcgaaaac
attatcgagcgcgcctttacactgtgcgagaatgatgtaatcgaaaccagcgatctacaa
ctaagacctgccagcaagcctgatggcgcgatggagttttcagagaattcagtacagcga
agtgaagacacctccttagaagatttcttagaaggcatagaaagaaaaaccatagaacaa
gcgctcgaagagactcgttggaacaaaaccgctgcggccaaaaagctgggtattacattt
agagcgctgcggtatcgtttgaagaagttagatatggagtag
DBGET
integrated database retrieval system
