Alkalimarinus alittae: NKI27_17365
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Entry
NKI27_17365 CDS
T08567
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
alkm
Alkalimarinus alittae
Pathway
alkm03030
DNA replication
alkm03430
Mismatch repair
alkm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NKI27_17365 (ssb)
03430 Mismatch repair
NKI27_17365 (ssb)
03440 Homologous recombination
NKI27_17365 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alkm03032
]
NKI27_17365 (ssb)
03400 DNA repair and recombination proteins [BR:
alkm03400
]
NKI27_17365 (ssb)
03029 Mitochondrial biogenesis [BR:
alkm03029
]
NKI27_17365 (ssb)
DNA replication proteins [BR:
alkm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NKI27_17365 (ssb)
DNA repair and recombination proteins [BR:
alkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
NKI27_17365 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
NKI27_17365 (ssb)
Mitochondrial biogenesis [BR:
alkm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
NKI27_17365 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
PB4_spike
AfAlkA-like_TBP-like
TFIIA
Motif
Other DBs
NCBI-ProteinID:
UZE95803
UniProt:
A0ABY6N118
LinkDB
All DBs
Position
complement(3864610..3865233)
Genome browser
AA seq
207 aa
AA seq
DB search
MVNKVILVGNLGKDPEVRYTPDGKAIANITLATSESWKDKNTGQRQEKTEWHRVVFFGGV
ASVVGEYLRKGSKIYVEGKLQTRKWQDQSGQEKYTTEVVVDAFSGTMQMLDSRSGGADSS
QGGYSAPMQQPQQQGGYAQQPQGQQSQAPQQRAPQRQPAPQQAAPQQAAPQQQAYQSQQG
GYAPQQPAQSAPPAPAPMDDFDDDIPF
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggttaataaggtaattttggttggtaatctgggcaaagatcctgaggtgcgctataca
cctgacggtaaagctattgccaatatcacgttagcaacttctgagtcatggaaagataaa
aataccggacagcgtcaagaaaaaacagagtggcaccgtgttgtgttttttggcggcgtt
gcatcagttgtgggtgaatacctgcgtaaaggctctaaaatttacgttgaaggtaagttg
cagactagaaagtggcaagaccaaagtgggcaagaaaaatacaccaccgaggtggtcgtt
gatgcctttagcggtacgatgcagatgctagattcacgaagcggcggtgctgactcatct
cagggtggctattcagcacctatgcagcaaccacagcagcaaggcggttacgcacagcaa
cctcaaggccaacagtctcaagcgccacaacaacgcgcaccgcagcgtcagcctgcacct
caacaggcagcacctcaacaggctgctcctcagcagcaagcttaccaatcacagcaaggt
ggatatgcaccacaacagccagcccagagtgcgccaccagccccagcgccaatggacgac
tttgatgatgatattccgttctaa
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