Alkalimarinus alittae: NKI27_17730
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Entry
NKI27_17730 CDS
T08567
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
alkm
Alkalimarinus alittae
Pathway
alkm00550
Peptidoglycan biosynthesis
alkm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NKI27_17730 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
alkm01003
]
NKI27_17730 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
alkm01011
]
NKI27_17730 (mrcB)
Enzymes [BR:
alkm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NKI27_17730 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NKI27_17730 (mrcB)
Glycosyltransferases [BR:
alkm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NKI27_17730 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
alkm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NKI27_17730 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
UZE95864
LinkDB
All DBs
Position
complement(3927580..3929922)
Genome browser
AA seq
780 aa
AA seq
DB search
MSKRTPSKSKGSSSPNSKHKSNHLLQKLRPSKGLIFKLIVVLLVALLSWVIYLDAVVRAK
FEGKRWEIPARVYARPLEIYDGLALNAENLQLELKTLGYKKTVKADIPGTFAHHGSGIVI
YSRGFLFADGKESARRVAFSIDSGVVNRFFVAKGEQNEILRLEPLQIGGIYPAKKEDRQL
VTLDQVPEGLIESLLWVEDRDFERHIGVAPLSIVRAMLANMKAGRVVQGGSTLTQQLVKN
FYLSRDKTIIRKATEAMMALLLEFHYEKRDILEAYINEVYLGQAGARAIHGFGMASQFYF
GKPLSDLRIEQSALLVALVKGPAYYDPRRHRARALERRNLVLSVLAEEGGISQSEAIKAR
GRPLGVIDKPSYSTNRYPAFIDLVKRQLASDYQPEDLQSEGLRIFTTLDPQIQERAETSL
KSTLASISKKRADSPLEGAVVVTGSESGEVVALVGGAEPKFSGFNRALDAIRPIGSIIKP
AVYLTALQQPDRYTLVTPLKDEPFALEFENGERWTPNNFDNKSHGTVPLYQALSKSYNLS
TARLGLDLGVDEVSATLRLLGVTRPMNIYPSLFLGATTLAPIDVTQMYQTIAASGFNVPV
RAIRSVTTSSGEELSRYAYEVDQVIDSNSMHLLQYGLIGVAKEGTARGVYRYLNADLTVA
GKTGTTNDSRDSWFAGFSGDYLGVVWLGHDDNRSTGLTGSSGALKVWGQLMKQFPQRPFD
PIKPSGINYRWIDESTGNLTQDGCTGARFVPFIVGSEPVESQSCTGGFSRARHWFNSLFN
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcgaacaccgtctaaatctaaagggtctagttcacctaactctaagcataag
agtaaccatttattgcagaaactgcgacctagtaaaggcctaatttttaagctgatagta
gtgttgttggtggcgctattgagttgggttatttatctggatgcagtggttagggccaaa
tttgaaggcaagcgctgggaaataccggctcgcgtgtatgctagacctcttgagatctat
gacggacttgcactcaatgctgaaaacctgcagctagagttgaagacgctagggtataaa
aagacggttaaggctgacatcccggggacatttgcgcatcatggttctggtattgtcatc
tattctcgcggttttttgtttgctgacggtaaagaaagtgccagacgtgtagcgttttct
atcgacagtggtgttgttaatcgtttttttgttgctaaaggcgagcagaacgaaatacta
aggctagagccgctacaaataggggggatataccctgccaagaaagaagatcgacagtta
gtgacacttgaccaggtgcctgaggggttgattgagtcgttgttgtgggttgaagatcgg
gattttgaaagacatattggtgttgcccctctttctattgttcgtgccatgctagccaat
atgaaggccggcagagtggttcagggaggcagcacgctgactcagcagttggttaagaat
ttttatctgagccgtgataaaactattattcgcaaagctactgaagcgatgatggcgctg
ttgttagagttccattatgaaaaacgggatattctagaggcgtatattaatgaggtgtat
ttaggtcaggcaggggcaagagcgattcatggatttggtatggcaagtcagttctatttc
ggtaagccgttgtctgaccttagaattgaacaaagtgcacttctagtggccttagtaaaa
ggccctgcttattatgacccgcgaagacatcgggcgcgagcgttagagagaagaaacttg
gtgttgagtgtcttggccgaagaaggtggaatatcgcagagtgaggctattaaagcacga
ggaaggccgttaggtgttattgataagccctcttatagcactaaccgttaccctgcgttt
attgatttggtcaagcggcagttagccagtgactatcaacccgaagatctacaaagcgaa
gggttgcggatattcactaccttggatcctcagattcaagaaagggcagaaactagtctt
aaatcgaccttagcgtcgatttctaaaaaaagggctgactcgcctttagagggcgcggta
gttgtgaccggaagtgaaagtggagaggttgtggcattggtgggcggagcagaacctaaa
ttctcaggctttaaccgggcattggatgctattcggcctataggctctattatcaagccg
gctgtttatttgacggcattgcaacagccagacagatatacactggtaacgccgctaaaa
gatgagccttttgcattagagtttgaaaacggtgaacgctggacaccaaacaatttcgat
aacaagagtcacggcacagtcccgttataccaagcattaagtaaatcctataatttatcc
actgcgcgcctggggcttgatctgggggttgatgaggtttccgctacgcttcggcttttg
ggtgtcacccgaccaatgaatatttatccatcattgtttttgggggcgaccacacttgcc
cctatcgacgtaactcaaatgtaccaaaccattgcagcgtcagggtttaatgttccggtt
agagcgattagaagtgtaactacctcgagtggtgaagagctttcgcgctatgcttatgaa
gttgatcaagtgattgattcgaattcgatgcacctgctgcaatatggtttgattggcgtt
gccaaagaaggcactgcgaggggtgtctatcggtatcttaatgctgaccttacggtagcc
ggtaaaaccggcacaaccaatgattcaagagacagttggtttgctggcttttcgggcgac
taccttggggtggtgtggttagggcacgatgataatcgctcaacggggctaacgggtagt
tcaggtgctctaaaagtatggggtcaattaatgaagcaatttcctcagaggccttttgac
ccgattaaaccttcaggtatcaactatcgctggattgatgaaagcacaggcaacttaacc
caagatggttgcacaggggcaaggttcgttccctttattgtgggaagtgaacctgtagag
agtcaatcatgtacgggtggtttttcgagagcaagacactggtttaattcattatttaac
taa
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