Alkalimarinus alittae: NKI27_18105
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Entry
NKI27_18105 CDS
T08567
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
alkm
Alkalimarinus alittae
Pathway
alkm03030
DNA replication
alkm03410
Base excision repair
alkm03420
Nucleotide excision repair
alkm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NKI27_18105 (polA)
03410 Base excision repair
NKI27_18105 (polA)
03420 Nucleotide excision repair
NKI27_18105 (polA)
03440 Homologous recombination
NKI27_18105 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alkm03032
]
NKI27_18105 (polA)
03400 DNA repair and recombination proteins [BR:
alkm03400
]
NKI27_18105 (polA)
Enzymes [BR:
alkm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NKI27_18105 (polA)
DNA replication proteins [BR:
alkm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NKI27_18105 (polA)
DNA repair and recombination proteins [BR:
alkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NKI27_18105 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NKI27_18105 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Prok-E2_E
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
UZE95937
UniProt:
A0ABY6N1E7
LinkDB
All DBs
Position
4011148..4013892
Genome browser
AA seq
914 aa
AA seq
DB search
MSKAQINKPVLLVDGSSYLFRAFHALPPLITSKGQPTGAIKGVINMIKRLQTDYPESKII
IIFDAKGKNFRHDLYDQYKANRPPMPEDLRSQIEPIHEIIKAMGLPLIIVPDVEADDVIG
TLATEASQKGIDTIISTGDKDMAQLVSPHVTLMNTMTNVYMDQAGVKEKFGVTPEQIIDY
LALVGDTVDNIPGVPKCGPKTAVKWLDQHGTLDAVMENAADVKGKIGENLRNSLELLPLS
YKLATIQTDVELDQGLDQIEHDAINNERLLALFKEYEFKSWINQLDKGDSTADTPNDSTA
TEDPSTSPEPAISVNYETVLTQASFDNWLDQLSKADLFAFDTETTSLNYMDAQIVGVSFC
VTPGEAAYVPFGHDYMGAPEQLDRNAVLDALKPLLEDESKKKVGQNLKYDMNVLANHGIR
LRGIAEDTMLESYVVNSVLTRHDMDSLAKKYLNHATIHFEDIAGKGAKQLTFNAIEIEKA
APYAAEDADITLRLHQKLSQALNEMPSLEPVYRDIELPLVPIIADIERDGALVDAHLLGV
QSKELEGRLLQLEREAFDLAGEAFNLSSPKQLQTIFFEKLELPVIKKTPKGQPSTAEPVL
QELALDYPLPKVILEYRGLSKLKSTYTDKLPLQINPSTGRIHTSYHQAVTATGRLSSSDP
NLQNIPIRTQEGRRVRQAFVAPKGYKLVAADYSQIELRIMAHLSQDVGLLNAFSEGLDVH
KATAAEVFGVATDEVTTDQRRSAKAINFGLIYGMSAFGLARQIKVDRKTAQSYIDRYFER
YPGVLDYMDRIRKQAHDDEYVETLFGRRLYLPEINANNKMRQQAAERTAINAPMQGSAAD
IIKKAMINVSKWLTESTLDARMIMQVHDELVLEVREDLVDEVTAGLLEKMESAARLDVPL
LVETGVGNNWDEAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcgcaaatcaacaaacctgttctcttagtcgacggctcttcttatttgttt
cgcgcatttcacgcgttaccgcctttaattacctctaaaggacagcctactggcgccatt
aaaggcgttattaatatgataaagcggctccagacagattacccagagtcaaagattatt
attatctttgacgccaagggtaaaaactttcgccacgatctttacgatcaatacaaagcg
aacagacctccgatgcctgaagacttaagaagtcagattgagcctattcatgaaattatt
aaagcgatgggactgccgctgattattgtgccagatgttgaggccgatgatgttatcgga
accttagccacagaagcctcccaaaagggcatcgacacgatcatttcgaccggcgataaa
gatatggcccagctggtctcccctcatgtaacgttaatgaacaccatgaccaatgtttat
atggatcaagccggtgttaaagaaaagtttggcgtaacgcccgagcaaatcatcgattac
ctcgcactggtcggcgataccgtagataacatcccgggcgtgccgaaatgtggaccaaag
accgcagttaaatggctcgatcagcacgggacactcgatgcggtaatggaaaatgcggca
gacgtaaaaggcaagatcggtgaaaatcttcgaaatagcctcgaacttcttcctttgtcc
tacaagttagccactatccagactgacgttgaattggatcaagggcttgatcagatagaa
catgacgctattaacaatgaaagattgttagcactatttaaagaatacgaatttaaaagc
tggattaatcagcttgacaaaggcgacagcacagccgacacgcccaatgactctacagcg
actgaagacccatcaacatcgcctgagcccgcaatcagtgttaattatgaaacagtgctc
acacaagcatcgtttgataactggttagaccaactatcaaaagccgacctatttgcattt
gataccgaaacaaccagtttaaactatatggacgcgcaaatagtcggtgtttcgttctgc
gtaacgccaggtgaagcggcttatgtacctttcggccacgactatatgggagcaccagag
caactcgacagaaacgcagtgctcgacgcattaaagcctttgctagaagatgagagcaag
aagaaagtcggccagaacttaaaatacgatatgaatgtgctggcaaatcacggcattcgc
cttagaggtattgcagaagataccatgcttgaatcctacgtggtcaactcggtattgacc
cgtcacgacatggacagcttggcgaagaaataccttaaccacgccactattcattttgaa
gatatcgctggtaaaggcgctaagcagttgaccttcaatgctattgagatcgaaaaagcc
gcgccttacgccgcagaagatgcagatatcaccctaagattgcatcagaagttatcgcaa
gcactaaacgagatgccttctctagaaccggtatatcgagatatcgaacttccactggta
cctatcattgcagatattgagcgcgacggcgcactggtcgatgcacacttgctcggcgta
caaagcaaagaattggaaggccgcctacttcaattagagcgagaagcctttgacctcgcc
ggcgaagcgttcaacttaagctcacccaagcaacttcaaaccatcttttttgaaaaactt
gagttaccggttattaagaaaacgccaaaaggccagccatcgactgcagagcctgttctt
caagagcttgcccttgattacccgttacccaaggttattcttgagtaccgaggcctcagc
aagctgaagtcaacttataccgataagctgccattgcaaataaacccgtcaacagggcgg
attcacacctcttaccatcaagcggtgaccgccactggacggctttcttcatccgatcca
aatctccagaatatacccatcagaacgcaagaaggccgacgcgttcgacaggcgtttgtc
gcgccaaaaggatataaattagtcgcagctgactactctcagattgaactcagaataatg
gctcatctgtctcaggatgtaggtttgctaaatgccttttcagaagggctagacgttcac
aaagcaaccgccgccgaggtgttcggcgtcgccactgacgaggtgacgacagatcagcgc
cgaagcgcaaaagcaatcaacttcgggcttatttacggcatgtcggcctttggtcttgct
cgccagataaaagtagaccgaaaaacagcacagagttatatcgaccgttattttgaacgt
tatcccggtgtattggattatatggaccgcattcgaaagcaagcccatgacgacgaatac
gttgaaacgttatttggtcgacgtctctacttacctgagattaacgccaacaataaaatg
cgccaacaagccgctgaacgcaccgcgattaatgcgcctatgcaaggtagtgccgcagac
atcatcaaaaaagcgatgatcaatgtctccaaatggctaacagaaagcaccttagatgcc
cgcatgattatgcaagtacatgatgaattggtattagaagtacgggaagacttggtggac
gaagtcactgcagggctattggagaagatggagtcagcagcgcgtttagatgttccttta
ttagtagaaacaggggtaggcaataactgggatgaagcccattaa
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