Xiashengella succiniciproducens: M9189_00820
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Entry
M9189_00820 CDS
T08178
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
alkq
Xiashengella succiniciproducens
Pathway
alkq03030
DNA replication
alkq03430
Mismatch repair
alkq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alkq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M9189_00820 (dnaE)
03430 Mismatch repair
M9189_00820 (dnaE)
03440 Homologous recombination
M9189_00820 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alkq03032
]
M9189_00820 (dnaE)
03400 DNA repair and recombination proteins [BR:
alkq03400
]
M9189_00820 (dnaE)
Enzymes [BR:
alkq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M9189_00820 (dnaE)
DNA replication proteins [BR:
alkq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M9189_00820 (dnaE)
DNA repair and recombination proteins [BR:
alkq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M9189_00820 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF655
T2SSK
DUF6282
Motif
Other DBs
NCBI-ProteinID:
URW79899
UniProt:
A0A9J6ZQJ8
LinkDB
All DBs
Position
185455..189231
Genome browser
AA seq
1258 aa
AA seq
DB search
MSLIPFTHLHVHSQYSVLDGQASVSAIVSKAAADGMKAVALTDHGTMLGIKEFYDTCKKK
GVKPIIGVEAYVAERSHEIKLEKVDRSGRHLILLAKNKQGYKNLIKLISKASIDGMFYRP
RIDKDLLLKHHEGLMVTSACLGGEVPQKIIHGRLDEAREAILWFKSVFGDDYYLELQRHP
AEDPVLRSQVYDVQVMVNEQLLKFSKELGVKVIAANDVHFSDAEMAEAHDIMICLNTGKD
LDDPNRMRYTRHEWFKTTEEMNKLFADVPEALLNTQEIADKVEDYSLDSPPIMPVFPIPE
DYGTIEQYREKYSVDDLKNEFGAERYDKLSGDYEHILRVKFEADYLEHLCYTGAKRLYGD
PVPDEVKERIDFELLTIKMMGFPGYFLIVQDFINAARKMGVLVGPGRGSAAGSAVAYCVG
ITTVDPIKHDLLFERFLNPDRISMPDVDIDFDDDGRAMVLDWVANKYGRDKVAHICTLGT
MAARSAIKDVGRVLRLPLAETDRIAKLIPEKPNTKLSGAYKEVLKLEMAKGSLEAAMDEI
DRKLQEARKEDREKDILKYEVQKIFAQEIERGRMENNQALLKTLELACDLEGSIRQTGVH
ACGVLIGRDPLVENIPLMQAKEANLLVTQYEGTLVESIGLLKMDFLGLKTLSIIKEALEA
IKQSKGIDIDIEAIPSDDIKTFELFGKGLTTAIFQFESAGMKKYLRELEPNRFEDLVAMN
ALYRPGPMEYIPDYISRKLGREQVHYDHPLMEEYLKDTYGITVFQEQVMLLSRKLGGFTR
GESDTLRKAMGKKMAEVMAKLKAKFDEGCKNNPEFMKGCQEMDKKPQDVIDKIWKDWEAF
ASYAFNKSHSVCYAKLAYQTGYLKANYPAEFMAGVLSRNLSDIGKISTFMDECRRMGIKL
LGPDINESYIKFTVNKDGALRFGMAAIKGVGEGVVEEIIKEREKRGPFKDVYDFFERVNL
QVINKKAVEALANAGAFDSLGNLHRAQFFAPIQGEEGTFIERLLRYGNRFQVDKATMASS
LFGAENALISIKKPEIPDCREYTTLEKLEKEKDLLGIYLSAHPLDDYRLELKHFCNLSVA
ALNNPENIKNREFVVGGMITGVRKGLTKKGNEFAIATVEDYNGSYEFAFFGQDFVNFIGI
ISNAKFVLIRGKVVPKRFKPDEWEIKVSKISLLSDVLDSMVNSITLRIPLQSLNDEIVNE
LAFVTMENRGKITLRFHIYDETNERQSVQLLSRSVMVNLSRELIDFFDNWEEISIALN
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaattccttttacacacttacacgttcactcacagtattcggttctggatggt
caggccagtgtttcagccattgtatccaaggcagcggcagacggaatgaaagctgtggct
ttgacagatcatggaaccatgttgggtattaaggagttttatgacacctgtaagaagaag
ggggtcaaacccattattggggttgaagcctatgttgcagagagaagccatgagatcaag
ttggagaaagttgacaggtcgggacgacatcttatccttcttgctaagaacaagcagggc
tataagaacctgataaaactgatatcaaaggcctctatcgatggtatgttctatcgtccc
cgtattgacaaggatctgttgctcaaacaccatgagggacttatggttacctctgcctgt
cttggaggggaagtaccgcagaagattatccacggaaggctggatgaggctcgtgaggct
atactgtggttcaagagtgtctttggtgatgattactatcttgaacttcagcgccaccca
gccgaggatcccgttctcaggagtcaggtctatgatgttcaggtgatggtcaatgagcag
ctcctcaagttttccaaggagcttggagtgaaagtgattgcagccaatgatgttcacttc
tcggatgctgaaatggctgaggcacacgatataatgatctgcctaaatacaggaaaggat
cttgatgatcccaaccggatgcgttatacaaggcatgagtggtttaagactaccgaggag
atgaataagctctttgctgatgtccctgaagccttgctcaacactcaggagattgctgat
aaggttgaagactactcactcgactctccacctattatgccagtgtttccaatcccggag
gattatggtaccattgagcaatacagggagaaatactcagtagatgatcttaagaatgaa
tttggtgcagaaagatatgacaagctaagcggtgattatgagcatattctaagggttaag
tttgaggctgactatcttgagcatttgtgctataccggggcaaagcgcctgtatggagac
ccggtgcctgatgaggtaaaagaacgaatagacttcgagctgttaaccattaagatgatg
ggttttccgggttacttccttatagtacaggactttataaatgctgcccgcaaaatggga
gttcttgtaggtccgggtcgcggatccgcggcaggatccgcggttgcttactgcgtgggc
attacaactgttgacccgatcaagcatgatctgctgtttgagcgatttctcaatcccgac
cgtatttccatgcctgatgttgatattgatttcgacgatgacggaagggcaatggtgtta
gattgggttgccaataaatatggcagggataaggtagcacatatttgtactttgggtacc
atggcagccagatcagctattaaggatgtgggccgggtcttaaggcttccgttggccgag
actgacaggatagccaagctgatacctgaaaagcccaataccaaacttagcggggcatac
aaagaggtgctgaaacttgagatggcaaaaggctccctggaagcagcgatggatgagatt
gatcgcaaattacaggaggcccgcaaggaagatagggagaaggacatacttaagtatgag
gttcaaaagatttttgcccaggaaatagagcgtgggcgcatggaaaataatcaggccttg
cttaaaacgcttgagctggcatgtgacctggaaggatctatacgtcagacaggagtccat
gcctgtggtgtcctcattggccgcgatcccctggtagagaatataccactgatgcaggcc
aaggaagctaatcttctggttacacagtatgaagggactcttgttgaatctattggtctt
cttaagatggatttcctgggacttaagactctgtcaattattaaagaagcacttgaagct
atcaagcagtccaagggtattgacatagatatagaagcgattccatccgacgatatcaag
acctttgagctttttggaaagggattgacaactgcgatcttccagtttgaatccgcaggt
atgaagaagtatctgcgcgagcttgagcccaaccgctttgaggaccttgttgcgatgaac
gcgttataccgtccgggtccgatggaatatatccccgactatatctcccgtaagcttgga
cgagagcaggtccactacgaccatcctttgatggaggaatatctaaaggatacttacggt
atcactgtgtttcaggagcaggtgatgcttttgtcgcgtaaacttgggggtttcacccgt
ggtgagtctgataccctgcgtaaggcaatgggtaagaagatggccgaggtgatggctaaa
cttaaggccaagtttgatgaaggctgtaagaacaaccctgagtttatgaagggctgtcag
gagatggacaagaagccacaggatgttattgacaagatatggaaggactgggaggctttt
gcaagctatgctttcaacaagtcgcattccgtttgttatgcgaaactggcatatcagacc
ggttatcttaaggcaaactatcctgctgagtttatggctggtgtgctaagccgtaacctg
agtgatataggcaagatctcgacctttatggacgagtgtcgacgtatgggcatcaaactg
cttggtccggatatcaatgagagctatatcaagtttacggtaaacaaggacggggccttg
cgttttggtatggcagccatcaagggagtaggagaaggagtcgttgaggaaatcattaag
gaacgcgaaaagagaggccccttcaaggatgtatatgacttttttgagagggtcaatcta
caggttattaacaagaaagctgttgaagcacttgctaatgcaggagctttcgacagcctt
ggaaatcttcacagagcgcagttcttcgcccctatccagggcgaagaaggaacctttatt
gaacgtctgttaaggtatggtaaccgcttccaggtagacaaggctacaatggcaagttcc
ctttttggagctgaaaacgcattaatctcaatcaagaagcctgaaatcccagattgcagg
gagtatacgaccctagaaaagcttgagaaggagaaagacctgttaggtatatatctttca
gcacacccacttgacgactatcgtctggagcttaagcatttctgtaaccttagtgtagca
gccctcaacaaccctgagaatatcaagaacagggagtttgtcgtgggaggtatgattaca
ggggtgaggaagggtcttactaaaaaaggaaatgagtttgctatagccaccgttgaagac
tataatggctcctatgagtttgccttttttgggcaggactttgtcaacttcataggcata
attagtaatgccaagtttgtattgatccgtggcaaagtagtgccaaagagattcaaaccg
gacgagtgggaaatcaaggtatccaagatatctctactgtctgatgttcttgacagcatg
gttaacagcatcacacttcgaattcctttacagagtctcaacgatgagatagtaaacgag
cttgcatttgtgacaatggagaacagaggcaagatcactcttcgcttccatatttatgat
gaaaccaacgagaggcagtctgttcaacttttatcccgctcagtaatggtcaatctgtcc
agggagcttatagatttcttcgataactgggaggaaatatctatagcattaaactag
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integrated database retrieval system
