Xiashengella succiniciproducens: M9189_01075
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Entry
M9189_01075 CDS
T08178
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
alkq
Xiashengella succiniciproducens
Pathway
alkq03410
Base excision repair
alkq03430
Mismatch repair
alkq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alkq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M9189_01075 (recJ)
03430 Mismatch repair
M9189_01075 (recJ)
03440 Homologous recombination
M9189_01075 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alkq03400
]
M9189_01075 (recJ)
DNA repair and recombination proteins [BR:
alkq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
M9189_01075 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M9189_01075 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M9189_01075 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
URW79950
UniProt:
A0A9J6ZQX9
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All DBs
Position
250786..252501
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AA seq
571 aa
AA seq
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MERRWKIKEPGDSAVVEALAGELNVDKIVANLLVQRGVDSFSSAKSFFRPSLDDLHDPFL
MKDMDIAVDRLCKAIRSGERIMIYGDYDVDGTTAVALVFSFLRRYYQNLLFYIPDRYTEG
YGISTKGIEAAADSGCSLIISLDCGIKAVNKIRYAKNFGIDFIVCDHHTPGEALPEALAC
IDPKRQDDTYPYKDLSGCGVGFKLLQAFCLHNGYPVEPLYKYLDLVAVSIAADIVPITGE
NRILAYYGLKQLNNDPGTGLKSIIHVSNMEGKELEMSDVVFKIGPRINAAGRIESGRDAV
ELLISGEEELAKSLSANINGHNEVRKDLDKKITDEALQLLINDPSQKERKSTVLFRPHWH
KGVIGIVASRLMDKFYRPTVIITESQGLATGSARSVEGFDLYSAVESCSDLLISFGGHTS
AAGLTMDIGNVELFAQRFEEWVEAHITPEQMIPQVEIDAEIRLKDINARLMRLLAQFAPF
GPANQKPLFVTRRVIDYGTTKLVGKGRDHIKFELIEECSGAIVRGIGFSMKDHLTKIQSR
EPFDIVYSIEENVYNGVSSVQLMIKDLLFPY
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggaaagacgttggaagatcaaagaaccaggtgatagtgctgttgttgaggctttggct
ggagaacttaatgtagataagattgtagctaatcttttggtacagagaggagttgacagt
ttctcatcagcaaagtcttttttcaggccttcacttgatgaccttcacgacccttttctt
atgaaggatatggatattgccgttgatcgcctgtgcaaggcgattcgcagtggggaaaga
attatgatctatggtgattatgatgttgacgggactactgctgtagcgcttgtgttttcc
tttctaaggcgttattatcaaaatcttttgttttatatccctgaccgatatactgaagga
tatggaatatctaccaagggtatagaagctgcagccgacagcggctgcagtctgataata
tcgctggactgcggcatcaaggcagtcaataaaataaggtatgcaaagaatttcggcatt
gactttatagtctgtgaccaccatactcctggggaagctcttcccgaggctttagcctgt
atagaccccaaacgtcaggatgatacctatccctacaaggacctctcaggttgtggtgtg
ggttttaagcttttgcaggctttctgcctgcataatggctaccctgttgagcctttatat
aagtatcttgaccttgtggcagtaagcattgctgccgatatagtgcctatcacgggggag
aaccggatattggcctattatggactcaagcagctgaacaacgatccgggtaccggattg
aaaagcatcattcatgtgtccaatatggagggcaaggagctggagatgagtgacgtagtg
tttaagattggtcccagaataaatgctgcaggacgtattgaatcaggacgcgatgcagtg
gaacttctgatcagtggagaggaagagcttgcaaaaagtcttagcgcaaatatcaatgga
cataatgaggttcgtaaggatcttgacaaaaagattacagatgaggctttgcaactactc
atcaatgatccttcacaaaaggagcgcaaaagtactgtcttgttcagacctcactggcat
aaaggggtaatagggattgttgcatcccgtctgatggataaattctacaggcctacggta
ataataaccgagagtcagggactggctaccggctcggctcgttcagttgaaggattcgac
ctttatagtgcagtggagtcatgcagtgacctgttgattagctttgggggtcacacatct
gctgccgggctaactatggatattgggaatgttgagctttttgcccagcgattcgaagag
tgggtagaggcacacatcactcccgaacagatgattcctcaggttgaaatagatgccgag
ataaggctcaaggacattaatgccagacttatgaggctgctagcccagtttgccccattt
gggcccgccaatcagaagcctttgtttgttacccgcagagtgattgattacggaaccacc
aaactagtgggaaaggggcgtgaccacatcaagtttgagcttattgaggaatgctcaggg
gcaatagtcagggggataggattctcaatgaaggatcatcttacgaagatccagtcaaga
gagccctttgatattgtttactccatcgaagagaatgtatacaatggagtaagttcggta
caactaatgattaaggatttgcttttcccttattag
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