Xiashengella succiniciproducens: M9189_01740
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Entry
M9189_01740 CDS
T08178
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
alkq
Xiashengella succiniciproducens
Pathway
alkq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alkq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9189_01740 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alkq03019
]
M9189_01740 (recQ)
03400 DNA repair and recombination proteins [BR:
alkq03400
]
M9189_01740 (recQ)
Enzymes [BR:
alkq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M9189_01740 (recQ)
Messenger RNA biogenesis [BR:
alkq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M9189_01740 (recQ)
DNA repair and recombination proteins [BR:
alkq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M9189_01740 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
OTU1_UBXL
Motif
Other DBs
NCBI-ProteinID:
URW80081
UniProt:
A0A9J6ZR46
LinkDB
All DBs
Position
418130..420310
Genome browser
AA seq
726 aa
AA seq
DB search
MTKQIDLIQHLKRNFGFDSFKGNQEEIIRNVLHGNDTFVLMPTGGGKSLCYQLPALMMEG
TAIVISPLIALMKNQVDAMRNFGEDDGVAHFLNSSLTKAAIAQVKEDVTSGRTKLLYVAP
ESLTKEENILFLQSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGEAPIIALTAT
ATPKVQHDIQKTLGIQEAHVFKSSFNRPNLYYEIRPKVDASKEIIKMLKENPGKSCIIYC
LSRKKVEELAELLVVNGIKALAYHAGMDAATRAANQDKFLYEEVDVIVATIAFGMGIDKP
DVRIVIHYDMPKSLEGYYQETGRAGRDGGEGRCIAFYSYKDIQKLEKFMQGKPVAEQEIG
KQLLIETVAYAETSLCRRKLLLHYFGEQYTEDSCDSCDNCLHPKEQFEGMEAITTLIKVI
LETKEKFKTDHVIDVLTGKESVSVKAYGYQELEIFGVGDDQDDKYWDAVIRHALIEGLIV
KEIENYGLLKISDKGREYLKKPYSILITKNHDYSDMEDESRAGGGTAAVDLELFSLLKDL
RKEISRKLNLPPFVIFQDPSLEAMSTYYPVTVEELQNMPGVGVGKAKRFGDEFLKLIKRH
VEENDIDRPIDMVVKSVANKSKLKISIIQSIDRKVPLNDLAEGKGIEMNELLKELESIVY
SGTRVNIDYYIDQVMDEEHRDDIFSYFKEEAESDDITTALMELGEDEFTEEEVRMVRIKF
ISEVGN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgactaagcaaattgatttgattcagcatttgaagcgtaatttcgggtttgattctttc
aaagggaatcaggaggagatcatacgcaatgtcctgcatggcaatgatactttcgtcctg
atgccaaccggaggaggaaagtccctatgctatcaattgcctgcgctaatgatggaaggt
acagcaattgttatctccccgctaattgctttgatgaagaatcaggtagatgctatgcgt
aactttggcgaggatgacggagtagcgcattttttaaattcttcacttaccaaagccgct
attgcacaggttaaagaggatgtcacctctggtcgtaccaaacttctgtatgttgcaccc
gaatcactgactaaggaggagaacatactgtttcttcaaagtgtaaagatttccttttat
gcagtggatgaggctcactgtatttctgaatggggtcatgattttagaccagagtatcgt
cgcatacgcccaataatcaatgagataggggaggcgccaataatagcactaactgcaact
gctacacccaaggtacagcatgatatacaaaagacattgggtattcaggaagcccatgtt
ttcaagtcgtccttcaacagacccaacctatactatgagataaggccaaaggttgatgca
tctaaagagattatcaagatgctgaaggagaatcctggaaagtcttgtataatctactgc
cttagccggaagaaagttgaagagcttgcagaacttctggttgtgaatggtataaaggct
ttggcctaccatgccggaatggatgctgcaacaagggcagccaaccaggataagtttctg
tatgaagaggttgacgtgattgttgctaccattgcctttggtatgggtattgataagcct
gacgtacgtatcgttatccactatgatatgcccaagagtcttgagggttattatcaggaa
acaggtcgtgccggtcgggatggaggtgaaggtcgttgtattgcattctatagctacaag
gatattcagaagcttgagaagtttatgcagggtaagcccgttgctgagcaggagataggt
aaacaactgcttattgagacagtggcatatgcagagacctctctgtgtcgtcgcaaactg
ttgctccattactttggtgaacagtatacagaagatagctgtgactcatgcgacaactgt
ctccatcccaaggagcagtttgaaggcatggaggctatcaccactctgattaaggtgata
ctggaaaccaaagagaagttcaaaacagaccatgtaatagatgtgctgacaggtaaggag
tccgtatcagtcaaggcctatggatatcaggaacttgagatttttggtgtcggagatgat
caggatgacaagtactgggatgctgtaatccgacatgcccttatcgaaggtcttattgta
aaagagatcgaaaactatggtctgcttaagataagtgacaagggtagggagtatctcaaa
aagccatatagtatcctgattaccaagaaccacgattatagcgatatggaggatgagagc
agggcaggtggcggcactgcagctgttgacttggaactcttttcactgcttaaggatctg
agaaaggagatatcccgtaagctcaatcttcctccctttgtgatattccaggatccctcg
ctggaggctatgtccacctactatcccgttactgtcgaagaactgcagaatatgccggga
gtaggtgtgggtaaggccaaacgttttggtgatgaatttctgaaactcattaagagacat
gtcgaagaaaacgacatcgatcgtccaatcgacatggtggtcaagtccgttgccaacaaa
tcaaaactcaaaatatccataattcagagtattgaccgcaaggtccctctcaatgatctg
gctgaaggtaaggggattgagatgaacgaactgctcaaggaactggaatctatagtttac
agcgggacaagagtcaatatagactactacattgatcaggttatggacgaagaacatagg
gatgatatcttctcttactttaaagaagaagctgagtcggatgatattacaacagccctg
atggaacttggtgaggatgaattcactgaggaagaggtcagaatggtcaggattaagttt
atctccgaggtaggaaactag
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